Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 NIPA2P5-201ENST00000452282 464 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 RN7SL75P-201ENST00000461926 281 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 AC109925.1-201ENST00000478069 331 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 AL163540.1-201ENST00000485382 386 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.76□□□□□ -1.97
LMX1BO60663 MLLT10P2-201ENST00000506434 249 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 MTCYBP40-201ENST00000509390 1135 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.76□□□□□ -1.97
LMX1BO60663 AC026782.1-201ENST00000512952 449 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 RNU1-86P-201ENST00000516108 154 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 RNU6-327P-201ENST00000516270 127 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 SCARNA15.2-201ENST00000516409 127 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 RNU1-107P-201ENST00000516617 154 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 RNU6-323P-201ENST00000521915 107 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 AC022080.3-201ENST00000544433 482 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 HIGD1AP1-201ENST00000550979 275 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.76□□□□□ -1.97
LMX1BO60663 LRRC37A5P-203ENST00000580181 585 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.76□□□□□ -1.97
LMX1BO60663 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.76□□□□□ -1.97
LMX1BO60663 AC073657.2-201ENST00000605661 303 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 uc_338.25-201ENST00000613756 156 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 AL157817.1-201ENST00000614264 790 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 PLCE1P1-201ENST00000622094 305 ntBASIC2.76□□□□□ -1.97
LMX1BO60663 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.76□□□□□ -1.97
LMX1BO60663 AC093831.2-201ENST00000624393 3427 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 MTND4P27-201ENST00000450813 1354 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
LMX1BO60663 AC116096.1-201ENST00000566804 2314 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.75□□□□□ -1.97
LMX1BO60663 RNU6-1167P-201ENST00000363227 94 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 Y_RNA.146-201ENST00000363549 102 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 RNU1-140P-201ENST00000365040 165 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 SNORA33.2-201ENST00000365413 134 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 SNORA22B-201ENST00000383876 138 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 RNU6-128P-201ENST00000383976 107 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 Y_RNA.473-201ENST00000384333 102 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 RNU6-601P-201ENST00000384540 107 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 RPL21P3-201ENST00000395517 478 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 AP000567.1-201ENST00000406413 156 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 EI24P1-201ENST00000416584 867 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.75□□□□□ -1.97
LMX1BO60663 UBE2D3P2-201ENST00000424409 445 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.75□□□□□ -1.97
LMX1BO60663 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.75□□□□□ -1.97
LMX1BO60663 GPM6BP2-201ENST00000432046 144 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 SNAP23P1-201ENST00000433229 246 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 GPM6BP1-201ENST00000446387 144 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 FABP5P15-201ENST00000453566 214 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 AC146507.2-201ENST00000460608 476 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 AC130509.1-201ENST00000464158 433 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.75□□□□□ -1.97
LMX1BO60663 AC092436.3-201ENST00000511788 257 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 SNORA31.8-201ENST00000516327 108 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 SNORA70.16-201ENST00000516390 95 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 AC022634.1-201ENST00000520765 532 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.75□□□□□ -1.97
LMX1BO60663 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.75□□□□□ -1.97
LMX1BO60663 AC012182.1-201ENST00000570133 895 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 AC100830.2-201ENST00000581636 240 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.75□□□□□ -1.97
LMX1BO60663 AL162730.1-201ENST00000605734 292 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 AC040896.1-201ENST00000613819 479 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 AL031601.2-202ENST00000622650 282 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 AC138627.2-201ENST00000624202 601 ntBASIC2.75□□□□□ -1.97
LMX1BO60663 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LMX1BO60663 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.75□□□□□ -1.97
LMX1BO60663 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LMX1BO60663 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.75□□□□□ -1.97
LMX1BO60663 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
LMX1BO60663 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.74□□□□□ -1.97
LMX1BO60663 KPNA2P1-201ENST00000458289 1591 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.74□□□□□ -1.97
LMX1BO60663 AC007256.1-201ENST00000392253 2765 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LMX1BO60663 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LMX1BO60663 Y_RNA.5-201ENST00000362334 102 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 SNORA80A-201ENST00000363922 136 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 RNU6-173P-201ENST00000364215 104 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LMX1BO60663 Y_RNA.404-201ENST00000383978 102 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 RNU6-308P-201ENST00000390957 107 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.74□□□□□ -1.97
LMX1BO60663 BTF3L4P3-201ENST00000418879 476 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 HMGB1P27-201ENST00000431429 603 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 MYL8P-204ENST00000431574 518 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.74□□□□□ -1.97
LMX1BO60663 AL359672.1-201ENST00000442302 409 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 RPS12P18-201ENST00000442381 270 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.74□□□□□ -1.97
LMX1BO60663 RPL23AP31-201ENST00000456160 467 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 RPL37P6-201ENST00000460682 294 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 AC090096.1-201ENST00000489168 390 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 AC006445.1-201ENST00000491925 405 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.74□□□□□ -1.97
LMX1BO60663 AC116337.1-201ENST00000509680 687 ntBASIC2.74□□□□□ -1.97
LMX1BO60663 RPL39P5-202ENST00000512505 151 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms