Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC005014.2-201ENST00000607795 599 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AC083806.3-201ENST00000614016 455 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AL162274.2-201ENST00000614406 332 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AC133104.2-201ENST00000615272 193 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 ATP5A1P2-202ENST00000616464 443 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 AC087588.2-201ENST00000617667 426 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SMAD6O43541 AL049641.1-201ENST00000441055 1948 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 KPNA2P1-201ENST00000458289 1591 ntBASIC3.16□□□□□ -1.9
SMAD6O43541 MIR422A-201ENST00000362286 90 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 RNU6-562P-201ENST00000362731 107 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 RNA5SP383-201ENST00000362934 120 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMAD6O43541 RNU6-1040P-201ENST00000383974 107 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 RNU6-1074P-201ENST00000383995 104 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 RNU6-701P-201ENST00000384059 107 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 RNU6-331P-201ENST00000384724 107 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 RNU6-907P-201ENST00000390924 102 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 RPS4XP3-201ENST00000398541 413 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 MCFD2P1-201ENST00000417812 300 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 AC099677.1-201ENST00000420575 175 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.15□□□□□ -1.91
SMAD6O43541 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.15□□□□□ -1.91
SMAD6O43541 AC104058.1-201ENST00000448028 297 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 FABP5P13-201ENST00000452144 328 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 MTATP8P1-201ENST00000467115 207 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 S100A11P2-201ENST00000467589 312 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 AC010631.1-201ENST00000474150 156 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 TRBV1-201ENST00000476502 284 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 RPL7P23-201ENST00000493874 747 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.15□□□□□ -1.91
SMAD6O43541 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.15□□□□□ -1.91
SMAD6O43541 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.15□□□□□ -1.91
SMAD6O43541 AC126177.3-201ENST00000551839 688 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.15□□□□□ -1.91
SMAD6O43541 MIR5692C1-201ENST00000585309 91 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.15□□□□□ -1.91
SMAD6O43541 AC004696.1-201ENST00000614345 607 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SMAD6O43541 MIR622-201ENST00000638396 96 ntBASIC3.15□□□□□ -1.91
SMAD6O43541 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMAD6O43541 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SMAD6O43541 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.14□□□□□ -1.91
SMAD6O43541 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SMAD6O43541 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
SMAD6O43541 MTND5P27-201ENST00000428871 1720 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.14□□□□□ -1.91
SMAD6O43541 RNU6-799P-201ENST00000363567 107 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 Y_RNA.158-201ENST00000363651 101 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 DYNLT3P1-201ENST00000378574 347 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AC117470.1-201ENST00000381974 330 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 RNU6-890P-201ENST00000384121 107 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AC110754.1-201ENST00000399740 601 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 MIR548F4-201ENST00000408515 105 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 RNU6-985P-201ENST00000410182 104 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 Z92545.1-201ENST00000411782 234 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.14□□□□□ -1.91
SMAD6O43541 AC018865.2-201ENST00000423631 129 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AC104332.2-201ENST00000429959 156 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 MTCYBP9-201ENST00000431021 303 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AC108059.2-201ENST00000434626 151 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.14□□□□□ -1.91
SMAD6O43541 MTCO3P45-201ENST00000443036 613 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AL590664.1-201ENST00000448065 339 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 RPL27AP5-201ENST00000469428 449 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AC097473.1-201ENST00000508142 408 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.14□□□□□ -1.91
SMAD6O43541 RNU6-1016P-201ENST00000516689 94 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.14□□□□□ -1.91
SMAD6O43541 AC009902.1-201ENST00000519351 183 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AC068657.1-201ENST00000520807 306 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.14□□□□□ -1.91
SMAD6O43541 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.14□□□□□ -1.91
SMAD6O43541 MIR3149-201ENST00000584629 83 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 VN1R107P-201ENST00000601784 209 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AL138889.2-201ENST00000603883 242 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AC124312.5-201ENST00000604451 268 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AL158032.1-201ENST00000605401 106 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 U2.17-201ENST00000611454 95 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 MIR6128-201ENST00000615528 109 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AC007485.1-201ENST00000616755 206 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 AC010378.1-201ENST00000619270 362 ntBASIC3.14□□□□□ -1.91
SMAD6O43541 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.13□□□□□ -1.91
SMAD6O43541 MTND5P30-201ENST00000452896 1731 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 DDX10P1-201ENST00000448545 1933 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.13□□□□□ -1.91
SMAD6O43541 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.13□□□□□ -1.91
SMAD6O43541 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SMAD6O43541 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SMAD6O43541 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SMAD6O43541 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.13□□□□□ -1.91
SMAD6O43541 Y_RNA.401-201ENST00000383965 117 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 SNORA75B-201ENST00000384053 137 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 RNU6-1032P-201ENST00000384100 107 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 Y_RNA.473-201ENST00000384333 102 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 RNU6-505P-201ENST00000384427 107 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 RNU6-393P-201ENST00000384475 107 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 SNORA1.3-201ENST00000384676 136 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 MRPL42P3-201ENST00000401492 326 ntBASIC3.13□□□□□ -1.91
SMAD6O43541 NDUFS5P1-201ENST00000405668 289 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms