Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 RNU6-1072P-201ENST00000384703 107 ntBASIC3.2□□□□□ -1.9
NPHP1O15259 RNU6-443P-201ENST00000384780 107 ntBASIC3.2□□□□□ -1.9
NPHP1O15259 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.2□□□□□ -1.9
NPHP1O15259 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.2□□□□□ -1.9
NPHP1O15259 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.2□□□□□ -1.9
NPHP1O15259 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.2□□□□□ -1.9
NPHP1O15259 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.2□□□□□ -1.9
NPHP1O15259 BX276092.3-201ENST00000424182 230 ntBASIC3.2□□□□□ -1.9
NPHP1O15259 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.2□□□□□ -1.9
NPHP1O15259 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.2□□□□□ -1.9
NPHP1O15259 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.2□□□□□ -1.9
NPHP1O15259 RPS27AP9-201ENST00000477681 438 ntBASIC3.2□□□□□ -1.9
NPHP1O15259 RPL7P43-201ENST00000478876 753 ntBASIC3.2□□□□□ -1.9
NPHP1O15259 MTAPP1-201ENST00000489154 819 ntBASIC3.2□□□□□ -1.9
NPHP1O15259 AC092436.1-201ENST00000506450 503 ntBASIC3.2□□□□□ -1.9
NPHP1O15259 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.2□□□□□ -1.9
NPHP1O15259 RNU5B-3P-201ENST00000516601 115 ntBASIC3.2□□□□□ -1.9
NPHP1O15259 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.2□□□□□ -1.9
NPHP1O15259 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.2□□□□□ -1.9
NPHP1O15259 AC023824.2-201ENST00000566185 400 ntBASIC3.2□□□□□ -1.9
NPHP1O15259 AC009163.5-201ENST00000575421 637 ntBASIC3.2□□□□□ -1.9
NPHP1O15259 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.2□□□□□ -1.9
NPHP1O15259 MIR4769-201ENST00000584126 77 ntBASIC3.2□□□□□ -1.9
NPHP1O15259 AL359198.2-201ENST00000611836 194 ntBASIC3.2□□□□□ -1.9
NPHP1O15259 AC024581.2-201ENST00000619986 252 ntBASIC3.2□□□□□ -1.9
NPHP1O15259 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.2□□□□□ -1.9
NPHP1O15259 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.2□□□□□ -1.9
NPHP1O15259 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.2□□□□□ -1.9
NPHP1O15259 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPHP1O15259 ZNF680P1-201ENST00000436625 1469 ntBASIC3.2□□□□□ -1.9
NPHP1O15259 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.2□□□□□ -1.9
NPHP1O15259 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.2□□□□□ -1.9
NPHP1O15259 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPHP1O15259 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.19□□□□□ -1.9
NPHP1O15259 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPHP1O15259 RNU1-91P-201ENST00000364746 163 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
NPHP1O15259 AL133475.1-201ENST00000404414 305 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 RNU4-46P-201ENST00000410818 138 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.19□□□□□ -1.9
NPHP1O15259 CALM1P1-201ENST00000442082 433 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.19□□□□□ -1.9
NPHP1O15259 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.19□□□□□ -1.9
NPHP1O15259 RPL23AP20-201ENST00000447965 421 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NPHP1O15259 MTCO2P18-201ENST00000457151 658 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 AC080013.2-201ENST00000460866 323 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 AC006512.1-201ENST00000468816 291 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 MED28P2-201ENST00000475771 317 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 RPL23AP45-201ENST00000476406 468 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 AC091133.4-201ENST00000511142 308 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 AC104136.1-201ENST00000512969 394 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHP1O15259 MIR892C-201ENST00000516410 77 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 Y_RNA.687-201ENST00000516558 91 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHP1O15259 FAM92A1P1-201ENST00000528023 890 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 AC243972.3-201ENST00000539655 198 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 AC105245.1-201ENST00000581934 244 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.19□□□□□ -1.9
NPHP1O15259 RNU6-91P-201ENST00000607774 107 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 AC244517.12-201ENST00000623581 663 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 Z82195.2-201ENST00000612348 18351 ntBASIC3.19□□□□□ -1.9
NPHP1O15259 Y_RNA.582-201ENST00000391023 95 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 GSTA9P-201ENST00000406231 611 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 U6atac.2-201ENST00000408644 118 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 RNU2-3P-201ENST00000410144 191 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 RNU6-607P-201ENST00000411283 108 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.18□□□□□ -1.9
NPHP1O15259 AL669831.1-202ENST00000428504 417 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 GTF2IP13-201ENST00000438487 386 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.18□□□□□ -1.9
NPHP1O15259 AL118520.1-201ENST00000450770 291 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.18□□□□□ -1.9
NPHP1O15259 GSTA11P-201ENST00000452866 669 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 Y_RNA.638-201ENST00000459374 113 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 snoU13.15-201ENST00000459407 104 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 RPL36AP48-201ENST00000485521 314 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 RPL22P13-201ENST00000493291 347 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 AC079382.1-201ENST00000493346 557 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
NPHP1O15259 AC010493.1-201ENST00000513479 292 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.18□□□□□ -1.9
NPHP1O15259 AC009063.1-201ENST00000563342 702 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.18□□□□□ -1.9
NPHP1O15259 LRRC37A5P-203ENST00000580181 585 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.18□□□□□ -1.9
NPHP1O15259 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.18□□□□□ -1.9
NPHP1O15259 AL391646.1-201ENST00000603860 190 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 AC069294.1-201ENST00000608397 350 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 SCARNA4-202ENST00000625402 129 ntBASIC3.18□□□□□ -1.9
NPHP1O15259 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPHP1O15259 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.18□□□□□ -1.9
NPHP1O15259 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.17□□□□□ -1.9
NPHP1O15259 Z75746.1-201ENST00000440243 2080 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 RNU6-858P-201ENST00000362436 107 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 RNU6-715P-201ENST00000365204 103 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 RNU6-45P-201ENST00000384471 107 ntBASIC3.17□□□□□ -1.9
NPHP1O15259 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.17□□□□□ -1.9
NPHP1O15259 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms