Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC022022.2-201ENST00000602989 360 ntBASIC2.54□□□□□ -2
CUX2O14529 BNIP3P9-201ENST00000603714 553 ntBASIC2.54□□□□□ -2
CUX2O14529 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.54□□□□□ -2
CUX2O14529 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CUX2O14529 RNU6-288P-201ENST00000363690 104 ntBASIC2.53□□□□□ -2
CUX2O14529 SNORA68.1-201ENST00000364537 132 ntBASIC2.53□□□□□ -2
CUX2O14529 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CUX2O14529 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.53□□□□□ -2
CUX2O14529 U8.14-201ENST00000390843 143 ntBASIC2.53□□□□□ -2
CUX2O14529 HIGD1AP15-201ENST00000416198 280 ntBASIC2.53□□□□□ -2
CUX2O14529 MTND2P9-201ENST00000422293 931 ntBASIC2.53□□□□□ -2
CUX2O14529 XKRYP1-201ENST00000423438 492 ntBASIC2.53□□□□□ -2
CUX2O14529 AC098614.2-201ENST00000426040 255 ntBASIC2.53□□□□□ -2
CUX2O14529 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.53□□□□□ -2
CUX2O14529 XKRYP2-201ENST00000432915 492 ntBASIC2.53□□□□□ -2
CUX2O14529 RPS15AP5-201ENST00000436276 388 ntBASIC2.53□□□□□ -2
CUX2O14529 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.53□□□□□ -2
CUX2O14529 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.53□□□□□ -2
CUX2O14529 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.53□□□□□ -2
CUX2O14529 RNU6-201P-201ENST00000517100 61 ntBASIC2.53□□□□□ -2
CUX2O14529 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.53□□□□□ -2
CUX2O14529 AL356432.3-201ENST00000568952 465 ntBASIC2.53□□□□□ -2
CUX2O14529 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.53□□□□□ -2
CUX2O14529 AC018714.1-201ENST00000605028 208 ntBASIC2.53□□□□□ -2
CUX2O14529 AL161734.1-201ENST00000609720 557 ntBASIC2.53□□□□□ -2
CUX2O14529 AC068944.2-201ENST00000610373 403 ntBASIC2.53□□□□□ -2
CUX2O14529 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.53□□□□□ -2
CUX2O14529 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
CUX2O14529 RNA5SP257-201ENST00000363023 116 ntBASIC2.52□□□□□ -2.01
CUX2O14529 RNA5SP393-201ENST00000363423 117 ntBASIC2.52□□□□□ -2.01
CUX2O14529 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CUX2O14529 MIR144-201ENST00000384886 86 ntBASIC2.52□□□□□ -2.01
CUX2O14529 RNU6-750P-201ENST00000390946 107 ntBASIC2.52□□□□□ -2.01
CUX2O14529 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.52□□□□□ -2.01
CUX2O14529 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.52□□□□□ -2.01
CUX2O14529 VN1R108P-201ENST00000431580 830 ntBASIC2.52□□□□□ -2.01
CUX2O14529 AC010153.1-201ENST00000432862 727 ntBASIC2.52□□□□□ -2.01
CUX2O14529 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.52□□□□□ -2.01
CUX2O14529 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.52□□□□□ -2.01
CUX2O14529 AL008629.1-201ENST00000438615 184 ntBASIC2.52□□□□□ -2.01
CUX2O14529 AL512286.1-201ENST00000439244 400 ntBASIC2.52□□□□□ -2.01
CUX2O14529 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.52□□□□□ -2.01
CUX2O14529 NEFMP1-201ENST00000443423 1006 ntBASIC2.52□□□□□ -2.01
CUX2O14529 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.52□□□□□ -2.01
CUX2O14529 SNORD97-201ENST00000459187 142 ntBASIC2.52□□□□□ -2.01
CUX2O14529 RNU2-10P-201ENST00000516375 211 ntBASIC2.52□□□□□ -2.01
CUX2O14529 AC123904.2-201ENST00000548059 300 ntBASIC2.52□□□□□ -2.01
CUX2O14529 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.52□□□□□ -2.01
CUX2O14529 MIR5694-201ENST00000581190 76 ntBASIC2.52□□□□□ -2.01
CUX2O14529 MIR3117-201ENST00000584034 78 ntBASIC2.52□□□□□ -2.01
CUX2O14529 AL161798.1-201ENST00000604630 131 ntBASIC2.52□□□□□ -2.01
CUX2O14529 AC007671.2-201ENST00000637344 619 ntBASIC2.52□□□□□ -2.01
CUX2O14529 RNA5SP62-201ENST00000363457 110 ntBASIC2.52□□□□□ -2.01
CUX2O14529 AL139397.2-201ENST00000404529 772 ntBASIC2.52□□□□□ -2.01
CUX2O14529 NDUFS5P1-201ENST00000405668 289 ntBASIC2.52□□□□□ -2.01
CUX2O14529 RNU2-25P-201ENST00000411041 191 ntBASIC2.52□□□□□ -2.01
CUX2O14529 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.52□□□□□ -2.01
CUX2O14529 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.52□□□□□ -2.01
CUX2O14529 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.52□□□□□ -2.01
CUX2O14529 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.52□□□□□ -2.01
CUX2O14529 RNA5SP471-201ENST00000516971 106 ntBASIC2.52□□□□□ -2.01
CUX2O14529 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
CUX2O14529 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.52□□□□□ -2.01
CUX2O14529 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.52□□□□□ -2.01
CUX2O14529 AC024614.2-201ENST00000577584 372 ntBASIC2.52□□□□□ -2.01
CUX2O14529 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.52□□□□□ -2.01
CUX2O14529 MTCYBP22-201ENST00000603788 447 ntBASIC2.52□□□□□ -2.01
CUX2O14529 DUSP12P1-201ENST00000612874 516 ntBASIC2.52□□□□□ -2.01
CUX2O14529 AC006927.3-201ENST00000638789 384 ntBASIC2.52□□□□□ -2.01
CUX2O14529 AC110491.1-201ENST00000562191 2010 ntBASIC2.51□□□□□ -2.01
CUX2O14529 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.51□□□□□ -2.01
CUX2O14529 RPL36AP53-201ENST00000432891 316 ntBASIC2.51□□□□□ -2.01
CUX2O14529 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.51□□□□□ -2.01
CUX2O14529 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.51□□□□□ -2.01
CUX2O14529 RPL39P36-201ENST00000490784 156 ntBASIC2.51□□□□□ -2.01
CUX2O14529 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.51□□□□□ -2.01
CUX2O14529 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.51□□□□□ -2.01
CUX2O14529 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.51□□□□□ -2.01
CUX2O14529 MTND1P24-201ENST00000552175 861 ntBASIC2.51□□□□□ -2.01
CUX2O14529 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.51□□□□□ -2.01
CUX2O14529 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.51□□□□□ -2.01
CUX2O14529 AC008751.2-201ENST00000597885 980 ntBASIC2.51□□□□□ -2.01
CUX2O14529 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.51□□□□□ -2.01
CUX2O14529 AC011939.3-201ENST00000613686 466 ntBASIC2.51□□□□□ -2.01
CUX2O14529 AC027807.2-201ENST00000616099 408 ntBASIC2.51□□□□□ -2.01
CUX2O14529 AC068057.2-201ENST00000624047 895 ntBASIC2.51□□□□□ -2.01
CUX2O14529 AC092192.1-201ENST00000633154 1018 ntBASIC2.51□□□□□ -2.01
CUX2O14529 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.51□□□□□ -2.01
CUX2O14529 AC010889.1-201ENST00000566193 2666 ntBASIC2.51□□□□□ -2.01
CUX2O14529 AL445523.1-201ENST00000451184 1362 ntBASIC2.5□□□□□ -2.01
CUX2O14529 RNU6-778P-201ENST00000363269 103 ntBASIC2.5□□□□□ -2.01
CUX2O14529 RNU5F-7P-201ENST00000363696 115 ntBASIC2.5□□□□□ -2.01
CUX2O14529 RNU6-501P-201ENST00000364072 100 ntBASIC2.5□□□□□ -2.01
CUX2O14529 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.5□□□□□ -2.01
CUX2O14529 RNU2-49P-201ENST00000410666 184 ntBASIC2.5□□□□□ -2.01
CUX2O14529 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.5□□□□□ -2.01
CUX2O14529 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.5□□□□□ -2.01
CUX2O14529 AL353777.1-201ENST00000425552 326 ntBASIC2.5□□□□□ -2.01
CUX2O14529 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CUX2O14529 HMGB1P9-201ENST00000429856 646 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms