Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MIR19B1-201ENST00000384829 87 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.35□□□□□ -2.35
HMGN4O00479 MTND2P5-201ENST00000432656 1006 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 MTND2P21-201ENST00000436242 1042 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.35□□□□□ -2.35
HMGN4O00479 HMGN2P9-201ENST00000476875 229 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 RPS27P22-201ENST00000478056 241 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 RAP1BP2-201ENST00000478270 544 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 TRBVA-201ENST00000498804 316 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.35□□□□□ -2.35
HMGN4O00479 ACA59.2-201ENST00000517061 156 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.35□□□□□ -2.35
HMGN4O00479 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.35□□□□□ -2.35
HMGN4O00479 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.35□□□□□ -2.35
HMGN4O00479 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.35□□□□□ -2.35
HMGN4O00479 AL512310.8-201ENST00000550183 120 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 AC095057.3-201ENST00000567102 1157 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 AC015688.6-201ENST00000577737 104 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.35□□□□□ -2.35
HMGN4O00479 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.35□□□□□ -2.35
HMGN4O00479 AP003465.2-201ENST00000602571 373 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 AL158211.4-201ENST00000606988 584 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 AC080188.3-201ENST00000624842 748 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 AC068205.3-201ENST00000636385 468 ntBASIC0.35□□□□□ -2.35
HMGN4O00479 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
HMGN4O00479 OR4G2P-201ENST00000328113 903 ntBASIC0.34□□□□□ -2.36
HMGN4O00479 RNU6-23P-201ENST00000363283 107 ntBASIC0.34□□□□□ -2.36
HMGN4O00479 RNU6-296P-201ENST00000384608 107 ntBASIC0.34□□□□□ -2.36
HMGN4O00479 SNORD116-23-201ENST00000384645 92 ntBASIC0.34□□□□□ -2.36
HMGN4O00479 MIR16-1-201ENST00000385271 89 ntBASIC0.34□□□□□ -2.36
HMGN4O00479 FTH1P12-201ENST00000432137 551 ntBASIC0.34□□□□□ -2.36
HMGN4O00479 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.34□□□□□ -2.36
HMGN4O00479 MTCYBP43-201ENST00000513621 740 ntBASIC0.34□□□□□ -2.36
HMGN4O00479 RNU5B-3P-201ENST00000516601 115 ntBASIC0.34□□□□□ -2.36
HMGN4O00479 AC103833.1-201ENST00000517442 172 ntBASIC0.34□□□□□ -2.36
HMGN4O00479 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.34□□□□□ -2.36
HMGN4O00479 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.34□□□□□ -2.36
HMGN4O00479 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.34□□□□□ -2.36
HMGN4O00479 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC0.34□□□□□ -2.36
HMGN4O00479 SGO1P1-201ENST00000603525 1447 ntBASIC0.34□□□□□ -2.36
HMGN4O00479 AC040896.1-201ENST00000613819 479 ntBASIC0.34□□□□□ -2.36
HMGN4O00479 AL118556.2-201ENST00000614375 824 ntBASIC0.34□□□□□ -2.36
HMGN4O00479 AL442644.1-201ENST00000454390 3105 ntBASIC0.34□□□□□ -2.36
HMGN4O00479 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
HMGN4O00479 ELL2P3-201ENST00000457883 1602 ntBASIC0.34□□□□□ -2.36
HMGN4O00479 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 Y_RNA.255-201ENST00000364581 97 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 RNU6-1235P-201ENST00000384559 107 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 AL031577.2-201ENST00000404133 280 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 AL161935.2-201ENST00000414627 60 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 AC114482.1-201ENST00000418010 247 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGN4O00479 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 AC008267.5-201ENST00000424928 265 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 AL589872.1-201ENST00000426602 288 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 AL591212.2-201ENST00000433923 257 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.33□□□□□ -2.36
HMGN4O00479 AC013267.1-201ENST00000458227 267 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 RNU6-498P-201ENST00000459468 107 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.33□□□□□ -2.36
HMGN4O00479 RPL7P43-201ENST00000478876 753 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.33□□□□□ -2.36
HMGN4O00479 RN7SKP88-201ENST00000516847 250 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.33□□□□□ -2.36
HMGN4O00479 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.33□□□□□ -2.36
HMGN4O00479 AC093519.1-201ENST00000566109 298 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 BNIP3P16-201ENST00000589779 534 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 AC008751.2-201ENST00000597885 980 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 VN1R82P-201ENST00000601481 356 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 AC022387.2-201ENST00000604050 448 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 AC004908.3-201ENST00000610248 625 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 7SK.8-201ENST00000612110 250 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 7SK.11-201ENST00000615477 250 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 7SK.13-201ENST00000622040 250 ntBASIC0.33□□□□□ -2.36
HMGN4O00479 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.33□□□□□ -2.36
HMGN4O00479 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
HMGN4O00479 AC138393.1-203ENST00000327086 343 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 RNU6-252P-201ENST00000363232 107 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.32□□□□□ -2.36
HMGN4O00479 RNU6-360P-201ENST00000390944 104 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 AL133475.1-201ENST00000404414 305 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 AC092634.6-201ENST00000418558 192 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 AC093422.3-201ENST00000428506 305 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.32□□□□□ -2.36
HMGN4O00479 C8orf59P1-201ENST00000429930 303 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.32□□□□□ -2.36
HMGN4O00479 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.32□□□□□ -2.36
HMGN4O00479 AC067942.3-201ENST00000512025 362 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC0.32□□□□□ -2.36
HMGN4O00479 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.32□□□□□ -2.36
HMGN4O00479 AC093249.1-201ENST00000567049 203 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.32□□□□□ -2.36
HMGN4O00479 BNIP3P24-201ENST00000593398 557 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 AC011451.2-201ENST00000604303 598 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 AL355802.4-201ENST00000607635 548 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 AC034229.4-201ENST00000607861 441 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 AC009229.3-201ENST00000608056 282 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 AC010133.1-201ENST00000615809 842 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms