Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.49□□□□□ -2.17
UPK1AO00322 RPL23AP6-201ENST00000446637 472 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK1AO00322 AL583843.1-201ENST00000456070 346 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 RPL7P43-201ENST00000478876 753 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK1AO00322 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK1AO00322 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK1AO00322 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.49□□□□□ -2.17
UPK1AO00322 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK1AO00322 RNU7-51P-201ENST00000516560 62 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.49□□□□□ -2.17
UPK1AO00322 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK1AO00322 MTND4P33-201ENST00000556706 766 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.49□□□□□ -2.17
UPK1AO00322 AC233702.2-202ENST00000562547 291 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 AC092325.1-201ENST00000566449 554 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 AC243960.4-201ENST00000600532 288 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 BNIP3P30-201ENST00000601184 574 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK1AO00322 uc_338.5-201ENST00000611839 155 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.49□□□□□ -2.17
UPK1AO00322 RBBP8P1-201ENST00000449447 1844 ntBASIC1.49□□□□□ -2.17
UPK1AO00322 AC002543.1-201ENST00000299783 1954 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UPK1AO00322 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.48□□□□□ -2.17
UPK1AO00322 RNU4-42P-201ENST00000364738 142 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 RNU6-809P-201ENST00000384461 107 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 RNU6-925P-201ENST00000384629 104 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
UPK1AO00322 AL356432.1-201ENST00000405809 419 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 RNA5SP450-201ENST00000411206 102 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 BX510359.4-201ENST00000423750 193 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.48□□□□□ -2.17
UPK1AO00322 AL137159.1-201ENST00000452808 512 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 DUXAP8-207ENST00000456786 622 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UPK1AO00322 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.48□□□□□ -2.17
UPK1AO00322 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UPK1AO00322 RNU2-53P-201ENST00000516257 147 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 RNU5A-4P-201ENST00000516588 111 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 AC022616.6-201ENST00000520479 119 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 MTND4LP18-201ENST00000526864 291 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.48□□□□□ -2.17
UPK1AO00322 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.48□□□□□ -2.17
UPK1AO00322 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.48□□□□□ -2.17
UPK1AO00322 AC025678.1-201ENST00000567861 338 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 MIR4299-201ENST00000577899 72 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.48□□□□□ -2.17
UPK1AO00322 SNRPGP17-201ENST00000603780 214 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 ELOCP5-201ENST00000604924 333 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 AL670379.2-201ENST00000604983 252 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 AL670379.4-201ENST00000605279 254 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 AL158032.1-201ENST00000605401 106 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 AC013244.3-201ENST00000605614 388 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 AL359547.2-201ENST00000615810 418 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 AL031667.3-201ENST00000620124 655 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 AC090517.3-201ENST00000625170 141 ntBASIC1.48□□□□□ -2.17
UPK1AO00322 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.48□□□□□ -2.17
UPK1AO00322 AL445523.1-201ENST00000451184 1362 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 MIR518A2-201ENST00000384966 87 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 Y_RNA.623-201ENST00000411128 95 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 UBE2V1P10-201ENST00000414685 269 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 AL365338.1-201ENST00000422282 858 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 RPS27AP14-201ENST00000422868 454 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.47□□□□□ -2.17
UPK1AO00322 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.47□□□□□ -2.17
UPK1AO00322 AL008629.1-201ENST00000438615 184 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 CR769776.1-201ENST00000441254 787 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.47□□□□□ -2.17
UPK1AO00322 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.47□□□□□ -2.17
UPK1AO00322 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.47□□□□□ -2.17
UPK1AO00322 AC018868.1-201ENST00000491307 315 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 HMGB1P30-201ENST00000492455 606 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.47□□□□□ -2.17
UPK1AO00322 AC119751.4-201ENST00000507498 357 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.47□□□□□ -2.17
UPK1AO00322 MTATP6P9-201ENST00000515039 680 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.47□□□□□ -2.17
UPK1AO00322 AC107934.1-201ENST00000522215 217 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.47□□□□□ -2.17
UPK1AO00322 AC093249.1-201ENST00000567049 203 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK1AO00322 AL109918.3-201ENST00000603072 338 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 AC021646.1-201ENST00000605469 484 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 AL391834.2-201ENST00000609982 546 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 AC092106.3-201ENST00000611308 722 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.47□□□□□ -2.17
UPK1AO00322 uc_338.15-201ENST00000615470 191 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 AC241585.2-209ENST00000638217 143 ntBASIC1.47□□□□□ -2.17
UPK1AO00322 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
UPK1AO00322 MIR412-201ENST00000362142 91 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 RNU6-1010P-201ENST00000362757 107 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 SNORD115-3-201ENST00000363100 82 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 RNA5SP190-201ENST00000365222 118 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 MIR186-201ENST00000384988 86 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.46□□□□□ -2.18
UPK1AO00322 AC074117.2-201ENST00000417130 397 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 AC106883.1-201ENST00000418805 562 ntBASIC1.46□□□□□ -2.18
UPK1AO00322 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms