Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 RPS3AP23-202ENST00000574601 686 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 MTND1P15-201ENST00000579262 949 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 MIR3611-201ENST00000584484 83 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC002984.1-201ENST00000591692 448 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL121917.1-203ENST00000605534 577 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 Z99129.1-201ENST00000612510 255 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC130324.3-201ENST00000614165 542 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC091834.1-201ENST00000614543 472 ntBASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-288P-201ENST00000363690 104 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNA5SP99-201ENST00000364020 114 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 Y_RNA.245-201ENST00000364493 95 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-61P-201ENST00000365528 109 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 Y_RNA.367-201ENST00000365544 101 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 Y_RNA.436-201ENST00000384097 102 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU2-66P-201ENST00000410650 161 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU2-8P-201ENST00000410727 190 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL109913.1-201ENST00000421173 514 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 RPL7P37-201ENST00000425095 738 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 ZNF863P-201ENST00000426746 417 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC137499.1-201ENST00000427602 88 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC010975.2-201ENST00000427781 588 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL358934.1-201ENST00000432346 324 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 RPL7P54-201ENST00000438336 674 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL136380.1-201ENST00000447970 162 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 C1DP4-201ENST00000455429 424 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 TPTE2P5-203ENST00000458118 728 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC098591.2-201ENST00000510152 315 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNA5SP290-201ENST00000517133 127 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC084851.1-201ENST00000529105 249 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AGGF1P4-201ENST00000568249 801 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC174048.1-201ENST00000603389 144 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC022893.3-201ENST00000607665 437 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC103591.3-201ENST00000608684 209 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC005332.10-201ENST00000612725 619 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 uc_338.20-201ENST00000621563 178 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 MTND4P1-201ENST00000457501 1466 ntBASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.98□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC103710.2-202ENST00000641454 2853 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 Y_RNA.41-201ENST00000362646 102 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU1-105P-201ENST00000363470 161 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-884P-201ENST00000363889 107 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-108P-201ENST00000365558 107 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 Z98749.2-208ENST00000381646 500 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-1103P-201ENST00000384150 107 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-1072P-201ENST00000384703 107 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-443P-201ENST00000384780 107 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 CALM2P2-201ENST00000428512 440 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL592045.1-201ENST00000429867 352 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL118520.1-201ENST00000450770 291 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 MTND1P27-201ENST00000451117 902 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 MRPS17P3-201ENST00000465453 385 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 RPS27P21-201ENST00000486977 252 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC109927.2-201ENST00000506416 303 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 MTND3P5-201ENST00000512798 333 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 SNORD27.1-201ENST00000516319 72 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 Y_RNA.689-201ENST00000516589 107 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-405P-201ENST00000516637 110 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNU6-914P-201ENST00000516749 109 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 RNA5SP165-201ENST00000517142 115 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL138976.2-201ENST00000563989 694 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 HMGN2P15-201ENST00000585707 270 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC008521.1-201ENST00000587471 187 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC087683.1-201ENST00000591187 441 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC245014.2-201ENST00000603689 287 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AL391646.1-201ENST00000603860 190 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC246785.4-201ENST00000605374 287 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC064807.4-201ENST00000607201 407 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC008498.1-201ENST00000613012 531 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AP001486.3-201ENST00000615334 372 ntBASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.97□□□□□ -2.09
TMX2-CTNND1H3BSU7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms