Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC078795.2-201ENST00000602835 1252 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC067747.1-201ENST00000608026 250 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC017083.3-201ENST00000609955 700 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 ZNF519P1-201ENST00000449011 1626 ntBASIC2.39□□□□□ -2.03
NEDD8-MDP1E9PL57 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 ZNF271P-202ENST00000465539 1970 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 AL139276.1-201ENST00000311910 1001 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 Y_RNA.1-201ENST00000352915 104 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-116P-201ENST00000384042 109 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-193P-201ENST00000410977 107 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 RNA5SP111-201ENST00000411386 101 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 AL358075.3-201ENST00000426289 226 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 RPS15AP28-201ENST00000435088 386 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 RPS12P2-201ENST00000439728 269 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 AL078601.1-201ENST00000444542 271 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 AC104058.1-201ENST00000448028 297 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 AC079382.1-201ENST00000493346 557 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 MRPS36P2-201ENST00000512569 299 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 RN7SKP219-201ENST00000516825 296 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 RNA5SP503-201ENST00000517047 117 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR4703-201ENST00000577728 79 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR4782-201ENST00000577987 79 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR5194-201ENST00000582634 120 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR548AC-201ENST00000585049 88 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 AC008752.3-201ENST00000588113 712 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR6873-201ENST00000622788 63 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 OR5AK4P-201ENST00000635912 903 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR3199-2-201ENST00000636243 86 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 U6.114-201ENST00000636407 96 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 CDC27P3-201ENST00000635418 1910 ntBASIC2.38□□□□□ -2.03
NEDD8-MDP1E9PL57 AC093536.2-201ENST00000565257 1406 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 MTND5P6-201ENST00000422338 1798 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-1287P-201ENST00000362914 107 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-384P-201ENST00000364900 104 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 Y_RNA.517-201ENST00000384551 106 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-1060P-201ENST00000384664 107 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-1158P-201ENST00000391167 107 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU4-55P-201ENST00000410731 137 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 USP9YP6-201ENST00000413550 854 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 UBE2V1P10-201ENST00000414685 269 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC096649.2-201ENST00000416186 393 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 DPH3P2-201ENST00000422618 250 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC007560.1-201ENST00000426912 237 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC010095.1-201ENST00000443543 144 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 NDUFB1P2-201ENST00000449477 176 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AL583843.1-201ENST00000456070 346 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC008716.1-201ENST00000511084 513 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 RN7SKP40-201ENST00000517211 242 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC105137.2-201ENST00000569073 466 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 MTATP6P3-201ENST00000581686 676 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AL391813.1-201ENST00000603098 260 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC091152.3-201ENST00000604227 325 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC104237.2-201ENST00000612456 443 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC124864.2-201ENST00000624736 186 ntBASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
NEDD8-MDP1E9PL57 AC135776.4-201ENST00000624300 1904 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 OR4G2P-201ENST00000328113 903 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 MIR412-201ENST00000362142 91 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 SNORA68.1-201ENST00000364537 132 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU6-898P-201ENST00000365627 104 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 Y_RNA.623-201ENST00000411128 95 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 RPL21P90-201ENST00000415692 466 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 MTCO3P30-201ENST00000426425 670 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AL669831.1-202ENST00000428504 417 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 GTF2IP13-201ENST00000438487 386 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 RPL9P6-201ENST00000492764 598 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 RPS27P27-201ENST00000498779 255 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AC107401.1-201ENST00000503426 685 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 AC105417.1-201ENST00000514691 285 ntBASIC2.36□□□□□ -2.03
NEDD8-MDP1E9PL57 RNU1-86P-201ENST00000516108 154 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms