Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 AL512310.8-201ENST00000550183 120 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 AC090615.1-201ENST00000577519 154 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 AC009237.15-201ENST00000610252 501 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 AL021879.1-201ENST00000611756 288 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 OR4G3P-201ENST00000633500 913 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 MTND5P35-201ENST00000557537 1720 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 AC100821.1-201ENST00000523153 2479 ntBASIC0.38□□□□□ -2.35
TRAV1-2A0A0B4J238 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AL161781.1-201ENST00000354277 403 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-188P-201ENST00000364207 107 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 SNORD115-48-201ENST00000364764 76 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 MIR217-201ENST00000384817 110 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 MIR608-201ENST00000384820 100 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 MIR10B-201ENST00000385011 110 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 FGF7P8-201ENST00000402994 292 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 USP9YP33-201ENST00000412220 421 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 TAF13P2-201ENST00000416876 286 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 RPS15AP12-201ENST00000419498 388 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 Z73417.1-201ENST00000447373 778 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 MTND5P13-201ENST00000513046 1079 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 RNA5SP384-201ENST00000516615 116 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-1092P-201ENST00000516955 87 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AC018630.3-201ENST00000542637 96 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 EIF1AXP2-201ENST00000555940 413 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 CYP4A27P-201ENST00000567218 190 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AL359821.1-201ENST00000605519 182 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AL390208.1-201ENST00000605885 644 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AL355802.4-201ENST00000607635 548 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AC040896.1-201ENST00000613819 479 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AC006213.5-201ENST00000619673 288 ntBASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV1-2A0A0B4J238 AC009541.1-201ENST00000438279 2662 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 SNORD114-19-201ENST00000363072 75 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-482P-201ENST00000391068 107 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 MTND4P24-201ENST00000424002 397 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 AL589872.1-201ENST00000426602 288 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 GPM6BP2-201ENST00000432046 144 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 RPL36AP53-201ENST00000432891 316 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 GPM6BP1-201ENST00000446387 144 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 AC104058.1-201ENST00000448028 297 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 OFD1P3Y-201ENST00000453312 783 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU2-53P-201ENST00000516257 147 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 CYP3A137P-201ENST00000562436 69 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 AC005786.1-201ENST00000588553 154 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 AC096772.1-201ENST00000609146 564 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 TUG1_2.1-201ENST00000614234 87 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 AC009269.6-201ENST00000621778 588 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 AC019226.1-201ENST00000625666 515 ntBASIC0.36□□□□□ -2.35
TRAV1-2A0A0B4J238 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 AC092447.10-201ENST00000620607 1652 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-492P-201ENST00000363035 104 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 RNA5SP499-201ENST00000363982 119 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-944P-201ENST00000364023 107 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 SNORD114-6-201ENST00000364393 72 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-1078P-201ENST00000364522 103 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 Y_RNA.255-201ENST00000364581 97 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 SNORD51.1-201ENST00000365405 77 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-1065P-201ENST00000384513 106 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 SNORD65C-201ENST00000390962 71 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 AP000275.1-201ENST00000411943 390 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 AL139421.1-201ENST00000423010 169 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 KATNBL1P3-201ENST00000443475 909 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 AL096829.2-201ENST00000446582 742 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 MTCYBP11-201ENST00000447254 1109 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms