Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AL355472.4-201ENST00000610233 626 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AL138955.1-201ENST00000622881 1040 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 AC006026.1-201ENST00000444025 1803 ntBASIC1.49□□□□□ -2.17
USH1CQ9Y6N9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 SNORA4.3-201ENST00000365564 137 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 RNU6-166P-201ENST00000384371 107 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 RNU6-1000P-201ENST00000391066 106 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 CYCSP49-201ENST00000420810 319 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 MTCO3P46-201ENST00000425787 232 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 TIMM9P1-201ENST00000436122 256 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 MTND2P29-201ENST00000438595 412 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 SSXP1-201ENST00000453640 473 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 RNU2-53P-201ENST00000516257 147 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 RNA5SP61-201ENST00000516453 100 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 IMMP1LP2-201ENST00000552954 492 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 MIR4255-201ENST00000579351 72 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 MTND3P19-201ENST00000603825 345 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 AC091834.1-201ENST00000614543 472 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 AC108479.2-201ENST00000617314 601 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 AC091304.6-201ENST00000619761 202 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 AL356596.1-201ENST00000624230 379 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 AC090517.3-201ENST00000625170 141 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 MTND5P42-201ENST00000637720 498 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 AC099786.3-201ENST00000565735 1410 ntBASIC1.48□□□□□ -2.17
USH1CQ9Y6N9 RBBP8P1-201ENST00000449447 1844 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 RNU1-17P-201ENST00000363022 152 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 RNU6-723P-201ENST00000383973 107 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 MIR29C-201ENST00000385231 88 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 MIR1283-2-201ENST00000408621 87 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 RPS3AP37-201ENST00000419176 745 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AL591212.2-201ENST00000433923 257 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 LARP1BP3-201ENST00000437229 869 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AL603825.1-201ENST00000438481 80 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AL358794.1-201ENST00000445689 381 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 HSPE1P24-201ENST00000450782 238 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AC012308.1-201ENST00000451232 178 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AMD1P1-201ENST00000457220 922 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AC104982.1-201ENST00000478775 574 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 SNORA25.15-201ENST00000516487 89 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 RNU6-1315P-201ENST00000517187 99 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AP000763.2-201ENST00000540641 163 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AC025678.1-201ENST00000567861 338 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AL356432.3-201ENST00000568952 465 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 MIR544B-201ENST00000582372 78 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AP001981.2-201ENST00000603241 418 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AC112220.3-201ENST00000605502 502 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 AC013437.2-201ENST00000639587 677 ntBASIC1.47□□□□□ -2.17
USH1CQ9Y6N9 MIR126-201ENST00000362291 85 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 Y_RNA.140-201ENST00000363474 103 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 SNORA4.1-201ENST00000364263 144 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 RNU6-769P-201ENST00000384407 104 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 Y_RNA.534-201ENST00000384599 112 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 MIR186-201ENST00000384988 86 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AL033519.2-201ENST00000403958 392 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 MTATP6P20-201ENST00000414147 562 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 ELOCP17-201ENST00000414751 326 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AC016831.2-201ENST00000417179 352 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 ELOCP9-201ENST00000418624 239 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AL591704.1-201ENST00000432574 275 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AL357134.1-201ENST00000445848 426 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 FCF1P6-201ENST00000456841 595 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 MED28P2-201ENST00000475771 317 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 MTCYBP35-201ENST00000503630 1137 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AC008834.1-201ENST00000511612 175 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 RNU6-467P-201ENST00000517027 110 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AL157871.3-201ENST00000557231 293 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AC023813.2-201ENST00000564321 469 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AC022893.3-201ENST00000607665 437 ntBASIC1.46□□□□□ -2.18
USH1CQ9Y6N9 AL365204.3-201ENST00000612448 685 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms