Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 RNU6-212P-201ENST00000362642 104 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 RNU1-106P-201ENST00000384382 164 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 U3.25-201ENST00000391209 220 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 MIR1251-201ENST00000408552 70 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 OR3A2-201ENST00000408891 1076 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 RPL7AP25-201ENST00000423357 805 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 AL353997.1-201ENST00000432936 108 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 AL035666.1-201ENST00000446195 348 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 PHBP16-201ENST00000446318 950 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 AC112771.1-201ENST00000463581 102 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 RN7SL442P-201ENST00000473804 320 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 RN7SL174P-201ENST00000475578 289 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 RN7SL271P-201ENST00000487601 295 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 AP000827.1-201ENST00000527814 258 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 MIR3171-201ENST00000584270 74 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 AC073410.2-201ENST00000603240 332 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 AL359198.2-201ENST00000611836 194 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 AL159153.1-201ENST00000619688 317 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 AL049767.1-202ENST00000637826 242 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 MAPK10-373ENST00000641983 6772 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 CEP170P1-201ENST00000502249 4587 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 AC007823.1-201ENST00000569932 1566 ntBASIC5.21□□□□□ -1.58
GTF3C3Q9Y5Q9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 RNU6-1159P-201ENST00000362933 107 ntBASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 Y_RNA.422-201ENST00000384054 114 ntBASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 AC018865.2-201ENST00000423631 129 ntBASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 RPL7P2-201ENST00000427639 268 ntBASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 Z98742.2-201ENST00000431564 187 ntBASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 OR4C10P-201ENST00000434991 931 ntBASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 snoU13.14-201ENST00000459372 104 ntBASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 AIG1P1-201ENST00000503376 148 ntBASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 Y_RNA.661-201ENST00000516003 99 ntBASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 RNU7-4P-201ENST00000516961 62 ntBASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 AC008033.2-201ENST00000542626 177 ntBASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 MIR4310-201ENST00000582950 57 ntBASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 AC002064.3-201ENST00000623448 346 ntBASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 AL513302.2-201ENST00000562313 1842 ntBASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC5.2□□□□□ -1.58
GTF3C3Q9Y5Q9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 MIR30E-201ENST00000362104 92 ntBASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 RNU1-57P-201ENST00000384491 166 ntBASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 RNA5SP113-201ENST00000410486 84 ntBASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 AC010401.1-201ENST00000463867 348 ntBASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 RPL27AP5-201ENST00000469428 449 ntBASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 AC022655.2-201ENST00000577280 318 ntBASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 AC006557.5-201ENST00000603126 811 ntBASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 AL732372.2-225ENST00000642124 456 ntBASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GTF3C3Q9Y5Q9 AC010329.5-201ENST00000623497 2174 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 AC058791.1-201ENST00000608412 3198 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 AC126755.2-208ENST00000327792 462 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 AC138969.1-213ENST00000331436 462 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 Y_RNA.5-201ENST00000362334 102 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 RNU6-486P-201ENST00000363116 107 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 MIR625-201ENST00000385047 85 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 CHEK2P5-201ENST00000423877 246 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 BX679664.1-201ENST00000434429 253 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 RN7SL601P-201ENST00000471221 293 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 AL163540.1-201ENST00000485382 386 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 RPL30P1-201ENST00000488676 339 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 RN7SKP66-201ENST00000516681 231 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 AC144568.1-201ENST00000520139 137 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 AC104581.2-201ENST00000572227 430 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 MIR5571-201ENST00000577998 113 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 MIR5701-3-201ENST00000578890 82 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 MIR5701-1-201ENST00000585138 82 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 MIR5701-2-201ENST00000615634 82 ntBASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
GTF3C3Q9Y5Q9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GTF3C3Q9Y5Q9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms