Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 AC125238.1-201ENST00000448842 249 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 AC013470.1-201ENST00000453438 462 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 RPL26P9-201ENST00000457466 433 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 AC106707.2-201ENST00000484182 374 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 AC104619.4-201ENST00000510773 249 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 AC113155.1-201ENST00000511141 769 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 Y_RNA.687-201ENST00000516558 91 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 TRMT10BP1-201ENST00000519377 943 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 AC104576.1-201ENST00000524225 88 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 AC005476.1-201ENST00000554427 397 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 AL353621.2-201ENST00000605340 133 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 AL161423.1-201ENST00000613700 262 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 AL161629.2-201ENST00000615347 275 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 AL161912.2-201ENST00000565707 3007 ntBASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHA3Q9Y5H8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 MIR670-201ENST00000390142 98 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 RNA5SP38-201ENST00000410750 119 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AL030996.1-201ENST00000411430 235 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AC016831.2-201ENST00000417179 352 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 BPY2DP-201ENST00000422208 265 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AC093151.1-201ENST00000427711 313 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AL714022.1-201ENST00000439897 151 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 HIGD1AP2-201ENST00000446367 280 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 BTF3P15-201ENST00000455606 336 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 SNORD5.1-201ENST00000458800 75 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 RNU7-187P-201ENST00000458985 68 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 snoU13.28-201ENST00000459235 104 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 snoU109.2-201ENST00000459316 135 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AC025518.1-201ENST00000479856 347 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 FCF1P8-201ENST00000510322 597 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AC068657.1-201ENST00000520807 306 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AL163153.1-201ENST00000554223 283 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AC018462.2-201ENST00000605375 395 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AL591516.1-201ENST00000611326 274 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AC039056.2-201ENST00000622261 511 ntBASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHA3Q9Y5H8 AC010680.1-201ENST00000590024 3590 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 RNA5SP119-201ENST00000362715 117 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 SNORA5A-201ENST00000384111 134 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 MIR591-201ENST00000385290 95 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 AL117339.3-201ENST00000418733 162 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 GOT2P5-201ENST00000433995 546 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 AC007677.1-201ENST00000445757 515 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 AC010099.1-201ENST00000455434 375 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 RPS27P29-201ENST00000463110 252 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 RPS29P20-201ENST00000489592 171 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 AC026782.1-201ENST00000512952 449 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 AC008739.3-201ENST00000603262 127 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 AC124303.1-201ENST00000605703 360 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 AC099778.2-201ENST00000610904 211 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 uc_338.1-201ENST00000612113 180 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 AC084781.2-201ENST00000615568 161 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 AC006111.3-201ENST00000622137 383 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 U4.7-201ENST00000638126 106 ntBASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.48□□□□□ -1.85
PCDHA3Q9Y5H8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 CDC27P3-201ENST00000635418 1910 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 MIR148B-201ENST00000362252 99 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 RNU4-35P-201ENST00000362588 141 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 RNA5SP124-201ENST00000362739 110 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 Y_RNA.187-201ENST00000363918 113 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 RNU5E-7P-201ENST00000365290 117 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 RNU6-898P-201ENST00000365627 104 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 RNU6-43P-201ENST00000384302 107 ntBASIC3.47□□□□□ -1.85
PCDHA3Q9Y5H8 RNU6-1077P-201ENST00000410506 102 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms