Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC093663.1-201ENST00000497190 394 ntBASIC3.98□□□□□ -1.77
CTDP1Q9Y5B0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.98□□□□□ -1.77
CTDP1Q9Y5B0 SNORA25.10-201ENST00000515926 124 ntBASIC3.98□□□□□ -1.77
CTDP1Q9Y5B0 RN7SKP57-201ENST00000517248 293 ntBASIC3.98□□□□□ -1.77
CTDP1Q9Y5B0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CTDP1Q9Y5B0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.98□□□□□ -1.77
CTDP1Q9Y5B0 MIR4276-201ENST00000584832 70 ntBASIC3.98□□□□□ -1.77
CTDP1Q9Y5B0 AC002044.1-201ENST00000606707 158 ntBASIC3.98□□□□□ -1.77
CTDP1Q9Y5B0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.98□□□□□ -1.77
CTDP1Q9Y5B0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.98□□□□□ -1.77
CTDP1Q9Y5B0 MFSD8-233ENST00000641482 4860 ntBASIC3.98□□□□□ -1.77
CTDP1Q9Y5B0 MTND5P30-201ENST00000452896 1731 ntBASIC3.98□□□□□ -1.77
CTDP1Q9Y5B0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
CTDP1Q9Y5B0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 Z83843.1-201ENST00000604070 3685 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 SNORD62.1-201ENST00000362541 86 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 RNU6-1303P-201ENST00000364841 107 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 RNU6-1032P-201ENST00000384100 107 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 RNU6-574P-201ENST00000384265 107 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 Y_RNA.463-201ENST00000384271 102 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 Y_RNA.480-201ENST00000384364 102 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 RNU6-306P-201ENST00000384617 107 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 SNORA75.6-201ENST00000391318 127 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 SNORA48.8-201ENST00000391324 134 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 RNU6-293P-201ENST00000411259 106 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 RPL21P90-201ENST00000415692 466 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 RPL21P40-201ENST00000428586 483 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 RPL26P6-201ENST00000440913 438 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 RPL31P60-201ENST00000478450 367 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 SNORA31.1-201ENST00000515993 133 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 SNORA31.5-201ENST00000516190 133 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 RNU6-914P-201ENST00000516749 109 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 AP003122.3-201ENST00000526316 255 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 AC010653.1-201ENST00000571108 881 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 AL162713.1-201ENST00000604480 262 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 AC005014.2-201ENST00000607795 599 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 CUL1P1-201ENST00000509510 2425 ntBASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.97□□□□□ -1.77
CTDP1Q9Y5B0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 RNU6-371P-201ENST00000364283 108 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 Y_RNA.364-201ENST00000365532 101 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 SNORA36C-201ENST00000384289 132 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 HMGN2P8-201ENST00000391458 268 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 RNU6-985P-201ENST00000410182 104 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 Z99755.1-201ENST00000414048 380 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 AC005300.1-201ENST00000428401 373 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 CYCSP32-201ENST00000440548 321 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 BTF3L4P4-201ENST00000506381 449 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 AC009901.1-201ENST00000506703 541 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 AC023442.1-201ENST00000531247 422 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 AL117187.1-201ENST00000555482 181 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 AL161423.1-201ENST00000613700 262 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 AC007485.1-201ENST00000616755 206 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 AC138305.3-201ENST00000624988 240 ntBASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
CTDP1Q9Y5B0 AC009812.4-201ENST00000569134 1805 ntBASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 AC138393.1-203ENST00000327086 343 ntBASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 RNU6-173P-201ENST00000364215 104 ntBASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 Y_RNA.252-201ENST00000364556 101 ntBASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 Z92545.1-201ENST00000411782 234 ntBASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 RPS29P31-201ENST00000446147 164 ntBASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 RNU7-138P-201ENST00000459479 64 ntBASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 AC069113.1-201ENST00000517763 267 ntBASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 AC073539.2-201ENST00000597113 165 ntBASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 AC008962.1-201ENST00000605729 304 ntBASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 AC006157.1-201ENST00000611750 366 ntBASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 MIR6076-201ENST00000617521 113 ntBASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.95□□□□□ -1.78
CTDP1Q9Y5B0 AC092435.3-201ENST00000565538 3654 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms