Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AIMP1P2-201ENST00000425294 312 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC104058.1-201ENST00000448028 297 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC006026.2-201ENST00000457376 180 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 RNU6-717P-201ENST00000459076 104 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC055731.1-201ENST00000474387 401 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC091965.2-201ENST00000512324 613 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 RNU2-53P-201ENST00000516257 147 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 RNA5SP137-201ENST00000516833 135 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 RPL7P20-201ENST00000520308 745 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 IMMP1LP2-201ENST00000552954 492 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC093249.1-201ENST00000567049 203 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 MIR3126-201ENST00000577443 74 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC090897.2-201ENST00000581715 130 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC007621.1-201ENST00000604544 437 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC103810.6-201ENST00000606708 136 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC008250.2-201ENST00000615261 205 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AP001486.3-201ENST00000615334 372 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 uc_338.15-201ENST00000615470 191 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 RMST_4.1-201ENST00000616886 107 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AL603755.1-201ENST00000619504 163 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC009831.4-201ENST00000620744 325 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 MIR6132-201ENST00000622083 109 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AC007494.3-201ENST00000624660 743 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 AL160394.1-201ENST00000624765 724 ntBASIC1.84□□□□□ -2.11
KCNIP3Q9Y2W7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
KCNIP3Q9Y2W7 MTND5P17-201ENST00000418405 1603 ntBASIC1.84□□□□□ -2.12
KCNIP3Q9Y2W7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 RNU1-23P-201ENST00000363361 144 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 RNY4P34-201ENST00000364779 95 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 Y_RNA.367-201ENST00000365544 101 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 Y_RNA.576-201ENST00000384781 102 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 MIR670-201ENST00000390142 98 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 RPL21P90-201ENST00000415692 466 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 MTND3P17-201ENST00000416968 344 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 CALM2P2-201ENST00000428512 440 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 MTCYBP1-201ENST00000454315 1119 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 RPS3P1-201ENST00000456781 192 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 RNA5SP233-201ENST00000459153 113 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 snoU109.1-201ENST00000459339 135 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 SNORA43.2-201ENST00000516652 128 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 RNU2-44P-201ENST00000516795 194 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-410P-201ENST00000517006 107 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 RNU2-19P-201ENST00000517288 84 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 LRRC34P1-201ENST00000542742 915 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 AC087883.1-201ENST00000551882 391 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 AC233702.2-202ENST00000562547 291 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 LRRC37A5P-203ENST00000580181 585 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 MIR5692A1-201ENST00000580523 69 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 MIR4444-1-201ENST00000581696 74 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 MIR4444-2-201ENST00000584390 74 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 Z99289.3-201ENST00000605586 594 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 OR2AS2P-201ENST00000606902 342 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 AP001506.1-201ENST00000615444 211 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 AC091932.3-201ENST00000624223 323 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 OR8B1P-202ENST00000641132 1178 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KCNIP3Q9Y2W7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-529P-201ENST00000363383 104 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 SNORD115-7-201ENST00000365306 82 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 RNU6-1032P-201ENST00000384100 107 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 RNA5SP390-201ENST00000410191 113 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 RNU2-23P-201ENST00000410545 195 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AC107081.1-201ENST00000414975 361 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AL365400.1-201ENST00000431854 640 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AL445567.1-201ENST00000439121 144 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 GAPDHP17-201ENST00000449858 1001 ntBASIC1.82□□□□□ -2.12
KCNIP3Q9Y2W7 AL033528.1-201ENST00000453780 140 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms