Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AL591212.2-201ENST00000433923 257 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC109927.2-201ENST00000506416 303 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 RNU2-53P-201ENST00000516257 147 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 GNAI2P1-201ENST00000541815 315 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AL157871.3-201ENST00000557231 293 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 MIR4255-201ENST00000579351 72 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC073410.2-201ENST00000603240 332 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AP001981.2-201ENST00000603241 418 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 SEPT7P9-203ENST00000604116 343 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC080013.3-201ENST00000606839 578 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC116312.1-201ENST00000606841 314 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC091965.4-201ENST00000607691 587 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC096772.1-201ENST00000609146 564 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC091304.6-201ENST00000619761 202 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC005858.4-201ENST00000623191 700 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC091965.5-201ENST00000624785 342 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC092192.1-201ENST00000633154 1018 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 AC013437.2-201ENST00000639587 677 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.12□□□□□ -2.23
HHLA3Q9XRX5 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 RNU6-858P-201ENST00000362436 107 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 RNU6-1010P-201ENST00000362757 107 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 RNA5SP190-201ENST00000365222 118 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 RNU6-1274P-201ENST00000384557 107 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 MIR517C-201ENST00000385103 95 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 RN7SKP284-201ENST00000411002 343 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AL513185.2-201ENST00000425543 193 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 FCF1P6-201ENST00000456841 595 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AL139824.2-201ENST00000458731 1095 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 MED28P2-201ENST00000475771 317 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 TPT1P8-201ENST00000510120 555 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AP003392.2-201ENST00000527269 208 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AP004247.1-201ENST00000531556 1289 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AP000763.2-201ENST00000540641 163 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 MTCYBP33-201ENST00000575007 1130 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 MIR1273C-201ENST00000578669 77 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 MIR4713-201ENST00000582691 75 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 KC877982.1-201ENST00000602313 470 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AL670379.6-201ENST00000603753 252 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AL670379.11-201ENST00000604059 253 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AC069431.2-201ENST00000604149 1099 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AC008162.1-201ENST00000604718 254 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AL670379.1-201ENST00000604752 252 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AP000860.1-201ENST00000605250 559 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AL670379.5-201ENST00000605253 252 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AL670379.12-201ENST00000605291 253 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AL670379.8-201ENST00000605353 252 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AL670379.7-201ENST00000605823 252 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 BX248123.2-201ENST00000606318 124 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AC108747.1-201ENST00000609508 535 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AC108479.2-201ENST00000617314 601 ntBASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
HHLA3Q9XRX5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 RNU5E-1-201ENST00000362477 120 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 Y_RNA.33-201ENST00000362591 102 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 RNU6-942P-201ENST00000363002 107 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 RNY3P13-201ENST00000365542 102 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 RNU6-843P-201ENST00000384454 104 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 MIR597-201ENST00000384968 97 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 RNU2-32P-201ENST00000411193 191 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 ELOCP17-201ENST00000414751 326 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AC138623.1-201ENST00000418060 216 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 ELOCP9-201ENST00000418624 239 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AC007098.1-201ENST00000420122 367 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 CYCSP49-201ENST00000420810 319 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AL022400.1-201ENST00000423946 935 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 VN1R108P-201ENST00000431580 830 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 PRELID3BP1-201ENST00000457142 540 ntBASIC1.1□□□□□ -2.23
HHLA3Q9XRX5 RNU1-98P-201ENST00000458992 160 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms