Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SMC3Q9UQE7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 U8.3-201ENST00000363321 132 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 RNU5A-2P-201ENST00000384337 116 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 MIR676-201ENST00000390702 67 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 MRPL42P2-201ENST00000403169 426 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AC137499.1-201ENST00000427602 88 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 ISCA1P6-201ENST00000427740 390 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AL591212.2-201ENST00000433923 257 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 MTCYBP1-201ENST00000454315 1119 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 FABP5P5-201ENST00000515537 406 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 RNU7-51P-201ENST00000516560 62 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 RNU6-1183P-201ENST00000517054 60 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 FAM92A1P1-201ENST00000528023 890 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AL512310.1-201ENST00000548639 172 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 MIR4435-1-201ENST00000582552 80 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AC010620.1-201ENST00000601088 1102 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AC130324.3-201ENST00000614165 542 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AC008250.2-201ENST00000615261 205 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AC110994.2-201ENST00000635481 492 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 AL512643.1-201ENST00000635735 524 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 Z99571.1-201ENST00000636677 394 ntBASIC2.31□□□□□ -2.04
SMC3Q9UQE7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.31□□□□□ -2.04
SMC3Q9UQE7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SMC3Q9UQE7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SMC3Q9UQE7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SMC3Q9UQE7 MIR147B-201ENST00000390185 80 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC114491.1-201ENST00000416095 246 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 Z99497.1-201ENST00000421282 135 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC119618.1-201ENST00000434191 222 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.3□□□□□ -2.04
SMC3Q9UQE7 MTND2P22-201ENST00000444325 1033 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 USP9YP29-201ENST00000445112 563 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC093899.1-201ENST00000457984 376 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 MTND1P22-201ENST00000510572 951 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC084851.1-201ENST00000529105 249 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.3□□□□□ -2.04
SMC3Q9UQE7 RPL21P5-201ENST00000554662 472 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC005771.1-201ENST00000585581 349 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 SNRPGP19-201ENST00000603826 189 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC068276.1-201ENST00000605793 379 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC022893.3-201ENST00000607665 437 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC138749.5-201ENST00000611461 208 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC091304.9-201ENST00000612091 226 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC009233.1-201ENST00000616477 371 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC116165.2-201ENST00000616705 206 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC009878.1-201ENST00000621819 340 ntBASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SMC3Q9UQE7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SMC3Q9UQE7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SMC3Q9UQE7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SMC3Q9UQE7 AP006437.1-201ENST00000641440 3685 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.29□□□□□ -2.04
SMC3Q9UQE7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SMC3Q9UQE7 TEX21P-201ENST00000447107 1476 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 MTND4P4-201ENST00000439033 1366 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 RNU4-82P-201ENST00000362443 140 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 Y_RNA.359-201ENST00000365498 102 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 RNU6-946P-201ENST00000383878 107 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 RNU6-748P-201ENST00000384648 107 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 SNORA40.3-201ENST00000390964 122 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.29□□□□□ -2.04
SMC3Q9UQE7 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.29□□□□□ -2.04
SMC3Q9UQE7 BX295541.1-201ENST00000417774 250 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.29□□□□□ -2.04
SMC3Q9UQE7 CALM2P2-201ENST00000428512 440 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.29□□□□□ -2.04
SMC3Q9UQE7 AL591704.1-201ENST00000432574 275 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 MTCO2P16-201ENST00000436962 677 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.29□□□□□ -2.04
SMC3Q9UQE7 MTCO2P29-201ENST00000465212 189 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 MTAPP1-201ENST00000489154 819 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.29□□□□□ -2.04
SMC3Q9UQE7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.29□□□□□ -2.04
SMC3Q9UQE7 AC010486.3-201ENST00000511602 785 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.29□□□□□ -2.04
SMC3Q9UQE7 OR5B19P-201ENST00000531766 928 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.29□□□□□ -2.04
SMC3Q9UQE7 OR11H5P-201ENST00000554039 926 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.29□□□□□ -2.04
SMC3Q9UQE7 MIR1273D-201ENST00000577266 86 ntBASIC2.29□□□□□ -2.04
SMC3Q9UQE7 MIR4782-201ENST00000577987 79 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms