Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 MIR3941-201ENST00000582572 103 ntBASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 AC008739.2-201ENST00000597006 317 ntBASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 FTX_3.1-201ENST00000610451 147 ntBASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 AC013412.1-201ENST00000610687 192 ntBASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDK11AQ9UQ88 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 MIR148B-201ENST00000362252 99 ntBASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 SNORD21-201ENST00000383953 95 ntBASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 RNU6-767P-201ENST00000384132 107 ntBASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 RNU6-510P-201ENST00000391239 108 ntBASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 RPL7P12-201ENST00000446719 750 ntBASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 RPS15AP27-201ENST00000449183 343 ntBASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 RNA5SP217-201ENST00000515959 91 ntBASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 AC023050.3-201ENST00000541142 333 ntBASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 Z82243.1-201ENST00000609432 473 ntBASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 U2.17-201ENST00000611454 95 ntBASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 AC090617.10-201ENST00000624308 134 ntBASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 AL359693.1-201ENST00000614959 2407 ntBASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 MTND5P27-201ENST00000428871 1720 ntBASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDK11AQ9UQ88 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 RNU6-715P-201ENST00000365204 103 ntBASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 Y_RNA.373-201ENST00000365600 103 ntBASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 SNORD70.1-201ENST00000391007 85 ntBASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 MIR888-201ENST00000401186 77 ntBASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 RNU6-1208P-201ENST00000459588 107 ntBASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 RPL21P41-201ENST00000459863 264 ntBASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 AC009901.1-201ENST00000506703 541 ntBASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 AC079140.5-201ENST00000507882 310 ntBASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 RNU6-1315P-201ENST00000517187 99 ntBASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 MIR3124-201ENST00000582636 67 ntBASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 AC022306.2-201ENST00000617563 647 ntBASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 HSPA8P4-201ENST00000511877 1920 ntBASIC4.54□□□□□ -1.68
CDK11AQ9UQ88 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 SNORD56.3-201ENST00000363507 71 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 Y_RNA.399-201ENST00000383955 105 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 Y_RNA.615-201ENST00000410769 117 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 RPL32P35-201ENST00000415214 394 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 AC104332.2-201ENST00000429959 156 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 USP9YP8-201ENST00000441913 500 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 FABP5P15-201ENST00000453566 214 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 AL590639.1-201ENST00000456484 337 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 AC092185.1-201ENST00000491371 97 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 RNU1-143P-201ENST00000516296 146 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 PSMA3P-201ENST00000555485 635 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 MIR1273C-201ENST00000578669 77 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 MIR5583-1-201ENST00000580941 59 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 MIR548AC-201ENST00000585049 88 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 AC092807.2-201ENST00000609367 243 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 U1.23-201ENST00000610293 146 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 RNU1-68P-201ENST00000615382 146 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 AC104260.1-201ENST00000616660 539 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 U1.39-201ENST00000621562 146 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 AC002064.3-201ENST00000623448 346 ntBASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CDK11AQ9UQ88 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 AC138915.1-201ENST00000565427 1685 ntBASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 RNU4-82P-201ENST00000362443 140 ntBASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 SNORA4.3-201ENST00000365564 137 ntBASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 RNU6-1009P-201ENST00000390996 107 ntBASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 AL360182.1-201ENST00000397433 468 ntBASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 RPL7P10-201ENST00000417407 739 ntBASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 HMGN1P12-201ENST00000499125 195 ntBASIC4.52□□□□□ -1.69
CDK11AQ9UQ88 MTCO3P9-201ENST00000506989 781 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms