Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 CASP1P1-201ENST00000526345 212 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AC090115.3-201ENST00000553218 849 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 TRAV28-201ENST00000557548 323 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AC073539.2-201ENST00000597113 165 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 C8orf59P2-201ENST00000603441 271 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AC004832.5-201ENST00000608677 401 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 Z82243.1-201ENST00000609432 473 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AC103705.1-201ENST00000619013 241 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AC112487.2-201ENST00000637950 304 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.95□□□□□ -1.94
SIX4Q9UIU6 AC007785.2-201ENST00000598627 1916 ntBASIC2.95□□□□□ -1.94
SIX4Q9UIU6 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
SIX4Q9UIU6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.94□□□□□ -1.94
SIX4Q9UIU6 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX4Q9UIU6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SIX4Q9UIU6 MIR26A1-201ENST00000362205 77 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 RNU6-1252P-201ENST00000363054 104 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 Y_RNA.184-201ENST00000363884 108 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 Y_RNA.399-201ENST00000383955 105 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 RNU6-45P-201ENST00000384471 107 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 Y_RNA.529-201ENST00000384586 119 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 Y_RNA.530-201ENST00000384587 101 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 RNU6-510P-201ENST00000391239 108 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SIX4Q9UIU6 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SIX4Q9UIU6 MTND3P8-201ENST00000412909 339 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 RPL21P90-201ENST00000415692 466 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 GPM6BP2-201ENST00000432046 144 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.94□□□□□ -1.94
SIX4Q9UIU6 AC093019.1-201ENST00000443135 252 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 GPM6BP1-201ENST00000446387 144 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 AC092001.1-201ENST00000453012 261 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 CECR9-201ENST00000453421 199 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 RNU6-329P-201ENST00000459618 107 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 AL135752.1-201ENST00000479477 471 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 AC103851.1-201ENST00000506833 274 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX4Q9UIU6 RNU6-1315P-201ENST00000517187 99 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 AC022690.1-201ENST00000526681 550 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 AP000763.2-201ENST00000540641 163 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 MTCO3P23-201ENST00000561363 289 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.94□□□□□ -1.94
SIX4Q9UIU6 AC012119.1-201ENST00000603184 222 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SIX4Q9UIU6 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 AC121333.1-201ENST00000567488 2709 ntBASIC2.94□□□□□ -1.94
SIX4Q9UIU6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.94□□□□□ -1.94
SIX4Q9UIU6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SIX4Q9UIU6 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.93□□□□□ -1.94
SIX4Q9UIU6 MAPK10-322ENST00000641485 4530 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 RNU6-371P-201ENST00000364283 108 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 Y_RNA.356-201ENST00000365475 113 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 Y_RNA.414-201ENST00000384011 101 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 SNORA75B-201ENST00000384053 137 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 RNU6-434P-201ENST00000384376 107 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 MIR23A-201ENST00000385245 73 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 AL356057.3-201ENST00000402607 340 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 RN7SKP32-201ENST00000410167 303 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 USP9YP20-201ENST00000419224 558 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.93□□□□□ -1.94
SIX4Q9UIU6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.93□□□□□ -1.94
SIX4Q9UIU6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.93□□□□□ -1.94
SIX4Q9UIU6 Z82210.1-201ENST00000440037 231 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 RNU7-167P-201ENST00000459160 62 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 AC087884.1-201ENST00000469738 328 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 SNORA31.1-201ENST00000515993 133 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 SNORA31.5-201ENST00000516190 133 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 RN7SKP256-201ENST00000517201 314 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 AP003122.3-201ENST00000526316 255 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 ATP5F1P5-201ENST00000526403 760 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 AC084851.1-201ENST00000529105 249 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 AC026464.5-201ENST00000562497 722 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 RPS3AP23-202ENST00000574601 686 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 MIR3605-201ENST00000583214 100 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 MIR548AC-201ENST00000585049 88 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 MIR3942-201ENST00000585264 109 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 AC008962.1-201ENST00000605729 304 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 AL121757.2-201ENST00000611223 313 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 U2.17-201ENST00000611454 95 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 AC022418.1-201ENST00000624118 445 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.93□□□□□ -1.94
SIX4Q9UIU6 AL133216.2-202ENST00000634512 349 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SIX4Q9UIU6 AC008264.2-201ENST00000610193 3731 ntBASIC2.93□□□□□ -1.94
SIX4Q9UIU6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SIX4Q9UIU6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SIX4Q9UIU6 Y_RNA.61-201ENST00000362835 102 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms