Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 RNU6-38P-201ENST00000384085 107 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 Y_RNA.480-201ENST00000384364 102 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 RNU6-45P-201ENST00000384471 107 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 AL139039.1-201ENST00000401900 692 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 AL590004.2-201ENST00000404787 371 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 RNU2-52P-201ENST00000410680 190 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 RNA5SP38-201ENST00000410750 119 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 NDUFS5P4-201ENST00000412983 318 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 AL451074.5-201ENST00000415894 435 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 ATG3P1-201ENST00000419507 911 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 AC063976.3-201ENST00000426849 329 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 RPS15AP27-201ENST00000449183 343 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 NIPA2P5-201ENST00000452282 464 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 MTATP6P7-201ENST00000453315 681 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 RNU6-333P-201ENST00000459117 107 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 AC116353.2-201ENST00000505332 712 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 CENPUP1-201ENST00000526649 1202 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 HSPE1P7-201ENST00000604681 321 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 RMST_3.1-201ENST00000611651 109 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 AC006504.8-201ENST00000621046 635 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 AC022418.1-201ENST00000624118 445 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 MIR6733-201ENST00000635723 61 ntBASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
HDAC6Q9UBN7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 AC108206.1-201ENST00000570186 4159 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 SNORD70.1-201ENST00000391007 85 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 MTND4LP11-201ENST00000422184 280 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 AC098614.2-201ENST00000426040 255 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 HMGB1P31-201ENST00000437242 427 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 NDUFB1P2-201ENST00000449477 176 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 MTND3P10-201ENST00000450967 341 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 SNORD109B-201ENST00000458961 67 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 SNORD109A-201ENST00000459128 67 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 RNU7-167P-201ENST00000459160 62 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 AC128713.1-201ENST00000471495 306 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 NACAP3-201ENST00000552100 481 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 AC078814.3-201ENST00000553036 491 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 AL645944.1-201ENST00000603857 493 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 AC107871.2-201ENST00000612894 502 ntBASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.18□□□□□ -1.9
HDAC6Q9UBN7 AC121333.1-201ENST00000567488 2709 ntBASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 Y_RNA.72-201ENST00000362894 103 ntBASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 RNU6-371P-201ENST00000364283 108 ntBASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 SNORA14A-201ENST00000364773 135 ntBASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 MIR181A2-201ENST00000384863 110 ntBASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 RPL19P1-201ENST00000411635 428 ntBASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 AC069439.1-201ENST00000494739 167 ntBASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 AC098799.2-201ENST00000509466 868 ntBASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 BNIP3P10-201ENST00000605360 577 ntBASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 RNU6-89P-201ENST00000606519 100 ntBASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 AC069234.5-201ENST00000611056 416 ntBASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 AC009033.1-201ENST00000624279 431 ntBASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 IGHVIII-44-202ENST00000636235 289 ntBASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HDAC6Q9UBN7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 AC010680.1-201ENST00000590024 3590 ntBASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 AL161431.1-201ENST00000618966 4205 ntBASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 RNU4-82P-201ENST00000362443 140 ntBASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 RNU4-20P-201ENST00000365601 151 ntBASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 AL360182.1-201ENST00000397433 468 ntBASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 RPL21P90-201ENST00000415692 466 ntBASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 AL669831.1-202ENST00000428504 417 ntBASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 AL121601.2-201ENST00000438019 707 ntBASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 GTF2IP13-201ENST00000438487 386 ntBASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 RPL12P25-201ENST00000455592 494 ntBASIC3.16□□□□□ -1.9
HDAC6Q9UBN7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms