Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 HSBP1P1-201ENST00000555205 166 ntBASIC3.95□□□□□ -1.78
PPARGC1AQ9UBK2 MIR5685-201ENST00000579080 79 ntBASIC3.95□□□□□ -1.78
PPARGC1AQ9UBK2 AC005046.1-201ENST00000608515 625 ntBASIC3.95□□□□□ -1.78
PPARGC1AQ9UBK2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PPARGC1AQ9UBK2 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PPARGC1AQ9UBK2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 CDC27P3-201ENST00000635418 1910 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 MIR423-201ENST00000362201 94 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 RNU4-42P-201ENST00000364738 142 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 RNU6-140P-201ENST00000384566 108 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 MIR30B-201ENST00000384850 88 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 MIR591-201ENST00000385290 95 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 RPS29P13-201ENST00000402041 169 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 AL591034.1-201ENST00000407447 340 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 AL353997.1-201ENST00000432936 108 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 HMGN2P20-201ENST00000437531 273 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 MTATP6P7-201ENST00000453315 681 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 U8.20-201ENST00000459445 131 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 HMGN2P13-201ENST00000476476 274 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 AC144568.1-201ENST00000520139 137 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 MIR4782-201ENST00000577987 79 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 MIR5701-3-201ENST00000578890 82 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 MIR5701-1-201ENST00000585138 82 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 AC100812.1-201ENST00000607622 580 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 MIR5701-2-201ENST00000615634 82 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
PPARGC1AQ9UBK2 AC091152.2-201ENST00000591628 2569 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 RNU6-595P-201ENST00000363944 107 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 RNU5E-7P-201ENST00000365290 117 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 SNORD14.1-201ENST00000365609 90 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 RNU6-217P-201ENST00000384164 104 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 RNU6-72P-201ENST00000384285 79 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 MIR521-1-201ENST00000384902 87 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 HLFP1-201ENST00000402375 499 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AL138878.1-201ENST00000405131 347 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 RPL17P36-201ENST00000420302 549 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 SSXP4-201ENST00000451349 245 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AC006026.2-201ENST00000457376 180 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 U3.44-201ENST00000458938 192 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AK3P2-201ENST00000507976 429 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 RNU6-911P-201ENST00000516523 104 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 RNU6-635P-201ENST00000516651 102 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AC009812.2-201ENST00000517657 457 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AC005476.1-201ENST00000554427 397 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AC106785.1-201ENST00000565935 262 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 SRGNP1-201ENST00000603392 451 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AL137849.1-201ENST00000604767 169 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AC008962.1-201ENST00000605729 304 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AL391261.4-201ENST00000616012 481 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 AC138627.2-201ENST00000624202 601 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 U4.7-201ENST00000638126 106 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 MTND5P9-201ENST00000503854 1755 ntBASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.93□□□□□ -1.78
PPARGC1AQ9UBK2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 AL136164.4-201ENST00000625013 2135 ntBASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 Y_RNA.126-201ENST00000363382 111 ntBASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 Y_RNA.276-201ENST00000364732 109 ntBASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 SET-203ENST00000372688 801 ntTSL 2 BASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 MIR493-201ENST00000385254 89 ntBASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 RNU6-1109P-201ENST00000391187 107 ntBASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 MIR1252-201ENST00000408861 65 ntBASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 RN7SKP53-201ENST00000411337 315 ntBASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 RPL26P27-201ENST00000414397 437 ntBASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 YPEL5P1-201ENST00000419731 367 ntBASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 AC007098.1-201ENST00000420122 367 ntBASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 AC073910.1-201ENST00000445047 438 ntBASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 RNU7-170P-201ENST00000459303 61 ntBASIC3.92□□□□□ -1.78
PPARGC1AQ9UBK2 AC010655.3-201ENST00000478818 450 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms