Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 CETN4P-201ENST00000432407 469 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 MRPL42P6-201ENST00000486397 371 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AC022493.1-201ENST00000492984 337 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 MTND4P2-201ENST00000507767 1203 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 RNU6-410P-201ENST00000517006 107 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 HSPE1P18-201ENST00000517602 280 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AC026407.1-201ENST00000518369 204 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AC090572.1-201ENST00000519251 160 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 OR5AQ1P-201ENST00000527596 927 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AP002453.2-201ENST00000533503 320 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AC007834.2-201ENST00000536310 343 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 OSBPL9P5-201ENST00000542581 171 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 MIR5571-201ENST00000577998 113 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AC008088.1-201ENST00000580993 280 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 CLIC4P2-201ENST00000601934 717 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AC121247.2-201ENST00000604776 136 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 MIR219B-201ENST00000637023 88 ntBASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CLCF1Q9UBD9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC138393.1-203ENST00000327086 343 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 SNORA38-201ENST00000363946 132 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 SNORA75B-201ENST00000384053 137 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 RNU6-195P-201ENST00000411352 109 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AL365338.1-201ENST00000422282 858 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AL627311.1-201ENST00000431514 115 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 MTATP6P16-201ENST00000434543 526 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AL022238.1-201ENST00000442557 355 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC079781.2-201ENST00000446424 169 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 NDUFB1P2-201ENST00000449477 176 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 RPL36AP48-201ENST00000485521 314 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC112206.3-201ENST00000514578 389 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 SNORA18.6-201ENST00000516792 115 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 RANP3-201ENST00000530970 276 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AP000889.2-201ENST00000532684 490 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC087241.2-201ENST00000535801 324 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 MTND3P12-201ENST00000559068 328 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC092325.1-201ENST00000566449 554 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC105245.1-201ENST00000581934 244 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC008521.1-201ENST00000587471 187 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC098848.2-201ENST00000588023 330 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 SEPT7P9-203ENST00000604116 343 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AL670379.10-201ENST00000604330 253 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AL670379.9-201ENST00000605428 253 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AL121992.2-201ENST00000606262 256 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 RNU6-91P-201ENST00000607774 107 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC010378.1-201ENST00000619270 362 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC244517.12-201ENST00000623581 663 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC092656.1-203ENST00000624134 423 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 AC138627.2-201ENST00000624202 601 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 CKAP2P1-201ENST00000555477 2049 ntBASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CLCF1Q9UBD9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
CLCF1Q9UBD9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.9□□□□□ -2.1
CLCF1Q9UBD9 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 SNORD116-8-201ENST00000384365 95 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 RNU6-297P-201ENST00000384636 107 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 AL023284.1-201ENST00000403956 276 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 U3.37-201ENST00000408528 213 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 MTND1P23-201ENST00000416931 372 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 MTND3P17-201ENST00000416968 344 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 AC097463.2-201ENST00000421074 142 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 CALM2P2-201ENST00000428512 440 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 GPR143P-201ENST00000434155 205 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 RBBP4P6-201ENST00000508098 202 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 HMGB3P3-201ENST00000510526 400 ntBASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.9□□□□□ -2.11
CLCF1Q9UBD9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms