Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.4□□□□□ -1.87
DNMT3BQ9UBC3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AC138393.1-203ENST00000327086 343 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 Y_RNA.339-201ENST00000365325 102 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 Y_RNA.460-201ENST00000384255 102 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 RNU6-166P-201ENST00000384371 107 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 MIR10A-201ENST00000385043 110 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 MIR888-201ENST00000401186 77 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AL356057.2-201ENST00000403318 432 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AP000567.1-201ENST00000406413 156 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 RPL37P10-201ENST00000412884 288 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 RPL26P27-201ENST00000414397 437 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AC236972.1-201ENST00000433225 199 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 MTATP6P7-201ENST00000453315 681 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AC006539.3-201ENST00000454258 129 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 HMGN2P7-201ENST00000456186 273 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 RPL23AP67-201ENST00000465341 474 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 MTND4P17-201ENST00000470444 350 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 RN7SKP24-201ENST00000515888 284 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 RNU6-928P-201ENST00000516876 104 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 MIR2682-201ENST00000580305 110 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AC100830.2-201ENST00000581636 240 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AC012531.5-201ENST00000611375 151 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AL157817.1-201ENST00000614264 790 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AC090574.1-201ENST00000623186 233 ntBASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.39□□□□□ -1.87
DNMT3BQ9UBC3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 MIR30E-201ENST00000362104 92 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 Y_RNA.58-201ENST00000362807 102 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 Y_RNA.154-201ENST00000363624 102 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 RNU6-384P-201ENST00000364900 104 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 RNY3P1-201ENST00000365085 102 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 RNY3-201ENST00000365484 102 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 Y_RNA.394-201ENST00000383942 103 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 Y_RNA.490-201ENST00000384413 102 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 Y_RNA.500-201ENST00000384466 111 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 SNORA44-201ENST00000384584 132 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 RNU6-658P-201ENST00000384606 106 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 MIR1289-1-201ENST00000408836 144 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 RN7SKP158-201ENST00000410453 326 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 RNU6-55P-201ENST00000411092 107 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 RNU6-954P-201ENST00000411355 107 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 UBE2V1P4-201ENST00000425374 344 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 RPS3AP52-201ENST00000435639 297 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 AC007677.1-201ENST00000445757 515 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 MTND1P17-201ENST00000448961 204 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 MTND5P5-201ENST00000503764 376 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 RNU6-703P-201ENST00000516946 107 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 HPRT1P3-201ENST00000539521 576 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 AC022080.3-201ENST00000544433 482 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 MIR4513-201ENST00000581077 86 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 POLR3GP2-201ENST00000588366 668 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 AL033523.1-201ENST00000605153 153 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 uc_338.1-201ENST00000612113 180 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 AC126177.8-201ENST00000618339 1015 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 AC073308.1-201ENST00000623696 305 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 AL355596.1-201ENST00000565399 3996 ntBASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.38□□□□□ -1.87
DNMT3BQ9UBC3 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
DNMT3BQ9UBC3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.37□□□□□ -1.87
DNMT3BQ9UBC3 RNU4-76P-201ENST00000364509 141 ntBASIC3.37□□□□□ -1.87
DNMT3BQ9UBC3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
DNMT3BQ9UBC3 XGY1-201ENST00000381172 446 ntBASIC3.37□□□□□ -1.87
DNMT3BQ9UBC3 RNU1-73P-201ENST00000383971 164 ntBASIC3.37□□□□□ -1.87
DNMT3BQ9UBC3 Y_RNA.431-201ENST00000384086 102 ntBASIC3.37□□□□□ -1.87
DNMT3BQ9UBC3 RNA5SP229-201ENST00000410809 99 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms