Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 RPS15AP34-201ENST00000487776 387 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 AC110768.1-201ENST00000509222 400 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 RN7SKP21-201ENST00000516503 220 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 SNORD59.2-201ENST00000516873 68 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 AC009902.1-201ENST00000519351 183 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 AC104576.1-201ENST00000524225 88 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 AC002545.1-201ENST00000592511 181 ntBASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SH3BP4Q9P0V3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-490P-201ENST00000362985 107 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 AP002088.1-201ENST00000382740 395 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-1179P-201ENST00000384667 107 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 MIR517A-201ENST00000385001 87 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 DBIP2-201ENST00000419076 262 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 AC008267.5-201ENST00000424928 265 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 GSTA11P-201ENST00000452866 669 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 RNA5SP291-201ENST00000517222 105 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-711P-201ENST00000517255 106 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 AC069113.1-201ENST00000517763 267 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 MIR3609-201ENST00000582661 80 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 SNORD39.4-201ENST00000620099 78 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 7SK.10-201ENST00000621414 298 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SH3BP4Q9P0V3 AL513302.2-201ENST00000562313 1842 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 MTND5P1-201ENST00000445440 1375 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 Y_RNA.33-201ENST00000362591 102 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 RN7SKP280-201ENST00000364196 304 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-395P-201ENST00000365662 106 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-741P-201ENST00000383889 107 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 MIR301A-201ENST00000385261 86 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 Y_RNA.645-201ENST00000391229 102 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 AC017079.2-201ENST00000416102 485 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 AL158156.1-201ENST00000422509 473 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 AC097713.2-201ENST00000430199 356 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 AL133396.1-201ENST00000432048 687 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 RPL23AP67-201ENST00000465341 474 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 AC113155.1-201ENST00000511141 769 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 RN7SKP18-201ENST00000516005 275 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 MIR892C-201ENST00000516410 77 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 IGHV3-76-201ENST00000522465 295 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 AL078596.1-201ENST00000624856 447 ntBASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SH3BP4Q9P0V3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 RNU1-75P-201ENST00000347264 129 ntBASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 MIR30E-201ENST00000362104 92 ntBASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 AL359837.1-201ENST00000381357 287 ntBASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 SNORA41-201ENST00000384675 132 ntBASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-1106P-201ENST00000390845 107 ntBASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 RPL21P17-201ENST00000397467 475 ntBASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-174P-201ENST00000410406 106 ntBASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 RNA5SP38-201ENST00000410750 119 ntBASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 RNU6-293P-201ENST00000411259 106 ntBASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 AL030996.1-201ENST00000411430 235 ntBASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 BX679664.1-201ENST00000434429 253 ntBASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.29□□□□□ -1.88
SH3BP4Q9P0V3 RPL12P25-201ENST00000455592 494 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms