Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 RNU6-166P-201ENST00000384371 107 ntBASIC2.55□□□□□ -2
HACD3Q9P035 RNU6-1215P-201ENST00000384441 102 ntBASIC2.55□□□□□ -2
HACD3Q9P035 MIR27B-201ENST00000385129 97 ntBASIC2.55□□□□□ -2
HACD3Q9P035 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.55□□□□□ -2
HACD3Q9P035 RNU6-903P-201ENST00000391270 109 ntBASIC2.55□□□□□ -2
HACD3Q9P035 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.55□□□□□ -2
HACD3Q9P035 AL513475.1-201ENST00000406602 315 ntBASIC2.55□□□□□ -2
HACD3Q9P035 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.55□□□□□ -2
HACD3Q9P035 USP9YP6-201ENST00000413550 854 ntBASIC2.55□□□□□ -2
HACD3Q9P035 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.55□□□□□ -2
HACD3Q9P035 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.55□□□□□ -2
HACD3Q9P035 Z82209.1-201ENST00000422141 2135 ntBASIC2.55□□□□□ -2
HACD3Q9P035 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.55□□□□□ -2
HACD3Q9P035 TIMM9P3-201ENST00000428659 274 ntBASIC2.55□□□□□ -2
HACD3Q9P035 MTND3P21-201ENST00000433774 331 ntBASIC2.55□□□□□ -2
HACD3Q9P035 RPS15AP5-201ENST00000436276 388 ntBASIC2.55□□□□□ -2
HACD3Q9P035 MTND1P34-201ENST00000438556 671 ntBASIC2.55□□□□□ -2
HACD3Q9P035 AC098831.1-201ENST00000440661 216 ntBASIC2.55□□□□□ -2
HACD3Q9P035 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.55□□□□□ -2
HACD3Q9P035 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.55□□□□□ -2
HACD3Q9P035 AC073415.1-201ENST00000449240 153 ntBASIC2.55□□□□□ -2
HACD3Q9P035 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.55□□□□□ -2
HACD3Q9P035 AL109933.2-201ENST00000452651 260 ntBASIC2.55□□□□□ -2
HACD3Q9P035 AC008716.1-201ENST00000511084 513 ntBASIC2.55□□□□□ -2
HACD3Q9P035 AC112206.3-201ENST00000514578 389 ntBASIC2.55□□□□□ -2
HACD3Q9P035 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.55□□□□□ -2
HACD3Q9P035 SNORA31.11-201ENST00000516528 139 ntBASIC2.55□□□□□ -2
HACD3Q9P035 RNU6-1183P-201ENST00000517054 60 ntBASIC2.55□□□□□ -2
HACD3Q9P035 RNA5SP402-201ENST00000517148 110 ntBASIC2.55□□□□□ -2
HACD3Q9P035 AC022634.1-201ENST00000520765 532 ntBASIC2.55□□□□□ -2
HACD3Q9P035 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.55□□□□□ -2
HACD3Q9P035 CKS1BP7-201ENST00000522230 235 ntBASIC2.55□□□□□ -2
HACD3Q9P035 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.55□□□□□ -2
HACD3Q9P035 NACAP3-201ENST00000552100 481 ntBASIC2.55□□□□□ -2
HACD3Q9P035 AC110491.1-201ENST00000562191 2010 ntBASIC2.55□□□□□ -2
HACD3Q9P035 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.55□□□□□ -2
HACD3Q9P035 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.55□□□□□ -2
HACD3Q9P035 BNIP3P30-201ENST00000601184 574 ntBASIC2.55□□□□□ -2
HACD3Q9P035 AC068790.6-201ENST00000602558 258 ntBASIC2.55□□□□□ -2
HACD3Q9P035 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.55□□□□□ -2
HACD3Q9P035 AL354950.2-201ENST00000617939 290 ntBASIC2.55□□□□□ -2
HACD3Q9P035 U6.99-201ENST00000637524 83 ntBASIC2.55□□□□□ -2
HACD3Q9P035 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
HACD3Q9P035 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
HACD3Q9P035 AC093536.2-201ENST00000565257 1406 ntBASIC2.54□□□□□ -2
HACD3Q9P035 RNU6-552P-201ENST00000362869 119 ntBASIC2.54□□□□□ -2
HACD3Q9P035 RNU6-1085P-201ENST00000363576 107 ntBASIC2.54□□□□□ -2
HACD3Q9P035 Y_RNA.372-201ENST00000365599 102 ntBASIC2.54□□□□□ -2
HACD3Q9P035 RNU6-517P-201ENST00000384362 110 ntBASIC2.54□□□□□ -2
HACD3Q9P035 RNU2-29P-201ENST00000410423 189 ntBASIC2.54□□□□□ -2
HACD3Q9P035 RNU4-46P-201ENST00000410818 138 ntBASIC2.54□□□□□ -2
HACD3Q9P035 RPL7P54-201ENST00000438336 674 ntBASIC2.54□□□□□ -2
HACD3Q9P035 AC016691.1-201ENST00000441321 413 ntBASIC2.54□□□□□ -2
HACD3Q9P035 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.54□□□□□ -2
HACD3Q9P035 AC083798.1-201ENST00000472671 131 ntBASIC2.54□□□□□ -2
HACD3Q9P035 AC026801.1-201ENST00000497178 464 ntBASIC2.54□□□□□ -2
HACD3Q9P035 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.54□□□□□ -2
HACD3Q9P035 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.54□□□□□ -2
HACD3Q9P035 RNU6-314P-201ENST00000516574 104 ntBASIC2.54□□□□□ -2
HACD3Q9P035 Y_RNA.693-201ENST00000516641 110 ntBASIC2.54□□□□□ -2
HACD3Q9P035 AK6P1-201ENST00000540219 478 ntBASIC2.54□□□□□ -2
HACD3Q9P035 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.54□□□□□ -2
HACD3Q9P035 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.54□□□□□ -2
HACD3Q9P035 TPRKBP2-201ENST00000565969 475 ntBASIC2.54□□□□□ -2
HACD3Q9P035 AL355877.2-201ENST00000603670 358 ntBASIC2.54□□□□□ -2
HACD3Q9P035 AL021997.1-201ENST00000605757 193 ntBASIC2.54□□□□□ -2
HACD3Q9P035 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.54□□□□□ -2
HACD3Q9P035 AC084782.3-201ENST00000612282 578 ntBASIC2.54□□□□□ -2
HACD3Q9P035 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
HACD3Q9P035 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.53□□□□□ -2
HACD3Q9P035 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.53□□□□□ -2
HACD3Q9P035 RNA5SP456-201ENST00000364002 114 ntBASIC2.53□□□□□ -2
HACD3Q9P035 RNU6-1322P-201ENST00000364309 107 ntBASIC2.53□□□□□ -2
HACD3Q9P035 Y_RNA.255-201ENST00000364581 97 ntBASIC2.53□□□□□ -2
HACD3Q9P035 RPL17P50-201ENST00000396131 546 ntBASIC2.53□□□□□ -2
HACD3Q9P035 RPL21P90-201ENST00000415692 466 ntBASIC2.53□□□□□ -2
HACD3Q9P035 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.53□□□□□ -2
HACD3Q9P035 AL358075.3-201ENST00000426289 226 ntBASIC2.53□□□□□ -2
HACD3Q9P035 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.53□□□□□ -2
HACD3Q9P035 AC007560.1-201ENST00000426912 237 ntBASIC2.53□□□□□ -2
HACD3Q9P035 C8orf59P1-201ENST00000429930 303 ntBASIC2.53□□□□□ -2
HACD3Q9P035 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.53□□□□□ -2
HACD3Q9P035 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.53□□□□□ -2
HACD3Q9P035 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.53□□□□□ -2
HACD3Q9P035 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.53□□□□□ -2
HACD3Q9P035 AL078601.1-201ENST00000444542 271 ntBASIC2.53□□□□□ -2
HACD3Q9P035 HMGN2P10-201ENST00000448085 265 ntBASIC2.53□□□□□ -2
HACD3Q9P035 AC003071.1-201ENST00000451219 789 ntBASIC2.53□□□□□ -2
HACD3Q9P035 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.53□□□□□ -2
HACD3Q9P035 AC107626.1-201ENST00000471084 183 ntBASIC2.53□□□□□ -2
HACD3Q9P035 AL163973.1-201ENST00000484753 577 ntBASIC2.53□□□□□ -2
HACD3Q9P035 AC113155.1-201ENST00000511141 769 ntBASIC2.53□□□□□ -2
HACD3Q9P035 RNU1-104P-201ENST00000517280 175 ntBASIC2.53□□□□□ -2
HACD3Q9P035 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.53□□□□□ -2
HACD3Q9P035 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.53□□□□□ -2
HACD3Q9P035 HMGB1P33-201ENST00000563485 527 ntBASIC2.53□□□□□ -2
HACD3Q9P035 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.53□□□□□ -2
HACD3Q9P035 MIR4782-201ENST00000577987 79 ntBASIC2.53□□□□□ -2
HACD3Q9P035 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.53□□□□□ -2
HACD3Q9P035 MIR5194-201ENST00000582634 120 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms