Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 Y_RNA.414-201ENST00000384011 101 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-434P-201ENST00000384376 107 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-45P-201ENST00000384471 107 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 Y_RNA.530-201ENST00000384587 101 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AL031121.1-201ENST00000406553 254 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 RNA5SP38-201ENST00000410750 119 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AC092573.2-201ENST00000434546 243 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 MTND4LP16-201ENST00000440828 295 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 CECR9-201ENST00000453421 199 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 RPL27AP5-201ENST00000469428 449 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AL160314.1-201ENST00000490836 438 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-143P-201ENST00000516942 93 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-56P-201ENST00000516986 93 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 SNORA70.24-201ENST00000517233 118 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AC090136.1-201ENST00000520009 240 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AC090115.3-201ENST00000553218 849 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AC073539.2-201ENST00000597113 165 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AC107294.1-201ENST00000609524 467 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 U2.17-201ENST00000611454 95 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AL162274.2-201ENST00000614406 332 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 AC103705.1-201ENST00000619013 241 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 RMST_7.1-201ENST00000621935 268 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 TPTEP1-208ENST00000636884 213 ntBASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SMARCAL1Q9NZC9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-1197P-201ENST00000391183 107 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 AL138885.1-201ENST00000405921 675 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 RNU2-33P-201ENST00000410344 192 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 USP9YP20-201ENST00000419224 558 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 GPM6BP2-201ENST00000432046 144 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 RPL39P40-201ENST00000445481 146 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 GPM6BP1-201ENST00000446387 144 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 AL360271.2-201ENST00000447710 161 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 RNU7-167P-201ENST00000459160 62 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 AC087884.1-201ENST00000469738 328 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 RPL7P43-201ENST00000478876 753 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 AC022493.1-201ENST00000492984 337 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 MTND3P25-201ENST00000509243 135 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 HIGD1AP13-201ENST00000509878 289 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 RNA5SP341-201ENST00000516261 117 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 AC105029.1-201ENST00000520250 669 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 CASP1P1-201ENST00000526345 212 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 AC005668.1-201ENST00000571142 476 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 AC078899.3-201ENST00000599065 212 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 AL132765.2-201ENST00000610812 351 ntBASIC2.94□□□□□ -1.94
SMARCAL1Q9NZC9 AC233263.6-201ENST00000631132 1963 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-799P-201ENST00000363567 107 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-525P-201ENST00000363685 104 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 Y_RNA.301-201ENST00000364990 103 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 SNORA9.2-201ENST00000365361 133 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-741P-201ENST00000383889 107 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 Y_RNA.399-201ENST00000383955 105 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 MT-TD-201ENST00000387419 68 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AL590383.1-201ENST00000428602 75 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 NDUFB4P6-201ENST00000436819 366 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 RPS3AP12-201ENST00000443616 753 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 FABP5P15-201ENST00000453566 214 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 RNA5SP310-201ENST00000459084 116 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AC117503.1-201ENST00000472241 394 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AC104136.1-201ENST00000512969 394 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-1088P-201ENST00000516850 104 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 RNU6-1315P-201ENST00000517187 99 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 TRAV28-201ENST00000557548 323 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 H3F3AP1-201ENST00000559984 334 ntBASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SMARCAL1Q9NZC9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms