Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 U2.5-201ENST00000619465 191 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 U2.10-201ENST00000620268 191 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 AC090517.3-201ENST00000625170 141 ntBASIC1.67□□□□□ -2.14
CLN6Q9NWW5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CLN6Q9NWW5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 SNORD3E-201ENST00000362899 217 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 SNORD56.2-201ENST00000363242 71 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 RNU6-72P-201ENST00000384285 79 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 MIR10A-201ENST00000385043 110 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 UBE2V1P2-201ENST00000397758 440 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AL158823.1-201ENST00000418441 478 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AC119618.1-201ENST00000434191 222 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AL136380.1-201ENST00000447970 162 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AP000797.1-201ENST00000478870 387 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 RPL21P99-201ENST00000480369 423 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 HMGB3P17-201ENST00000504195 649 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AF131216.2-201ENST00000512316 564 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AC112206.3-201ENST00000514578 389 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AC109329.1-201ENST00000518744 317 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AP002770.2-201ENST00000543613 532 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AC090897.2-201ENST00000581715 130 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AC243960.4-201ENST00000600532 288 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AL670379.2-201ENST00000604983 252 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AL670379.4-201ENST00000605279 254 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 AC005296.1-201ENST00000616145 209 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 HAUS6P2-201ENST00000433254 2404 ntBASIC1.66□□□□□ -2.14
CLN6Q9NWW5 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CLN6Q9NWW5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
CLN6Q9NWW5 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
CLN6Q9NWW5 RNU6-942P-201ENST00000363002 107 ntBASIC1.65□□□□□ -2.15
CLN6Q9NWW5 RNU6-487P-201ENST00000365430 104 ntBASIC1.65□□□□□ -2.15
CLN6Q9NWW5 RPL22P18-201ENST00000417197 377 ntBASIC1.65□□□□□ -2.15
CLN6Q9NWW5 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.65□□□□□ -2.15
CLN6Q9NWW5 AC137499.1-201ENST00000427602 88 ntBASIC1.65□□□□□ -2.15
CLN6Q9NWW5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.65□□□□□ -2.15
CLN6Q9NWW5 snoU109.1-201ENST00000459339 135 ntBASIC1.65□□□□□ -2.15
CLN6Q9NWW5 AC006512.1-201ENST00000468816 291 ntBASIC1.65□□□□□ -2.15
CLN6Q9NWW5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.65□□□□□ -2.15
CLN6Q9NWW5 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.65□□□□□ -2.15
CLN6Q9NWW5 AP000763.2-201ENST00000540641 163 ntBASIC1.65□□□□□ -2.15
CLN6Q9NWW5 ADI1P3-201ENST00000549509 470 ntBASIC1.65□□□□□ -2.15
CLN6Q9NWW5 AC091489.2-201ENST00000566263 604 ntBASIC1.65□□□□□ -2.15
CLN6Q9NWW5 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.65□□□□□ -2.15
CLN6Q9NWW5 AL359999.1-201ENST00000604513 294 ntBASIC1.65□□□□□ -2.15
CLN6Q9NWW5 AL773524.1-201ENST00000614065 229 ntBASIC1.65□□□□□ -2.15
CLN6Q9NWW5 U6.42-201ENST00000618440 107 ntBASIC1.65□□□□□ -2.15
CLN6Q9NWW5 AL078595.3-201ENST00000623815 1166 ntBASIC1.65□□□□□ -2.15
CLN6Q9NWW5 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.65□□□□□ -2.15
CLN6Q9NWW5 AC092881.1-201ENST00000638218 2733 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 AC103710.2-202ENST00000641454 2853 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 SNORD115-3-201ENST00000363100 82 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 RNU6-501P-201ENST00000364072 100 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 SNORD14B-201ENST00000364533 90 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 SNORD115.1-201ENST00000391109 76 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.64□□□□□ -2.15
CLN6Q9NWW5 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.64□□□□□ -2.15
CLN6Q9NWW5 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.64□□□□□ -2.15
CLN6Q9NWW5 RPL23AP6-201ENST00000446637 472 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 NDUFB1P2-201ENST00000449477 176 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.64□□□□□ -2.15
CLN6Q9NWW5 AL049873.1-201ENST00000480540 376 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 AC091965.2-201ENST00000512324 613 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 RNU2-44P-201ENST00000516795 194 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.64□□□□□ -2.15
CLN6Q9NWW5 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.64□□□□□ -2.15
CLN6Q9NWW5 OR5AL2P-201ENST00000532185 920 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 PCMTD1P2-201ENST00000565017 355 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 MIR548AC-201ENST00000585049 88 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 DEFB131E-202ENST00000602581 683 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 AL138889.2-201ENST00000603883 242 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 AC105129.3-201ENST00000605455 485 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 AC012409.4-201ENST00000612923 249 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 SCARNA4-202ENST00000625402 129 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 OR4G3P-201ENST00000633500 913 ntBASIC1.64□□□□□ -2.15
CLN6Q9NWW5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.63□□□□□ -2.15
CLN6Q9NWW5 RNU6-655P-201ENST00000362858 107 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 RNU5F-6P-201ENST00000362979 116 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 SNORD113-6-201ENST00000363345 75 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 SNORD116-20-201ENST00000384529 92 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 CISD1P1-201ENST00000393907 327 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 MRPL42P2-201ENST00000403169 426 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 AL356432.1-201ENST00000405809 419 ntBASIC1.63□□□□□ -2.15
CLN6Q9NWW5 RNA5SP425-201ENST00000410336 112 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms