Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
POLE3Q9NRF9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
POLE3Q9NRF9 RNU6-212P-201ENST00000362642 104 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 RNU6-529P-201ENST00000363383 104 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 MIR518A2-201ENST00000384966 87 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 MIR676-201ENST00000390702 67 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 SNORA40.19-201ENST00000390846 128 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 RPL23AP32-201ENST00000395315 459 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 HMGB3P2-201ENST00000411913 584 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 AC107081.1-201ENST00000414975 361 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 HIGD1AP15-201ENST00000416198 280 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 AL139413.1-201ENST00000421309 217 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.1□□□□□ -2.07
POLE3Q9NRF9 AC096920.1-201ENST00000423991 241 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.1□□□□□ -2.07
POLE3Q9NRF9 MTND6P13-201ENST00000443510 523 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 AL591719.1-201ENST00000444669 744 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 AC126389.1-201ENST00000477436 290 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 AC004263.1-201ENST00000479327 332 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.1□□□□□ -2.07
POLE3Q9NRF9 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.1□□□□□ -2.07
POLE3Q9NRF9 RPL21P5-201ENST00000554662 472 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.1□□□□□ -2.07
POLE3Q9NRF9 AC022022.2-201ENST00000602989 360 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 AL353778.1-201ENST00000603149 408 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 SNRPGP17-201ENST00000603780 214 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 AC004223.4-201ENST00000612426 332 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.1□□□□□ -2.07
POLE3Q9NRF9 AC009831.4-201ENST00000620744 325 ntBASIC2.1□□□□□ -2.07
POLE3Q9NRF9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.1□□□□□ -2.07
POLE3Q9NRF9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AL136360.1-201ENST00000503377 1900 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.09□□□□□ -2.07
POLE3Q9NRF9 SNORD115-3-201ENST00000363100 82 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 RNU6-622P-201ENST00000384272 103 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 SNORA48.3-201ENST00000391081 134 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 C1DP2-201ENST00000418167 426 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AC010099.3-201ENST00000423896 409 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AC018634.1-201ENST00000437554 401 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AC006512.1-201ENST00000468816 291 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.09□□□□□ -2.07
POLE3Q9NRF9 RNU6-415P-201ENST00000516252 97 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 RN7SKP265-201ENST00000516448 223 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 SNORA31.23-201ENST00000517219 133 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.09□□□□□ -2.07
POLE3Q9NRF9 EEF1A1P37-201ENST00000522748 715 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AP000763.2-201ENST00000540641 163 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.09□□□□□ -2.07
POLE3Q9NRF9 MIR4448-201ENST00000584360 86 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.09□□□□□ -2.07
POLE3Q9NRF9 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AC091932.3-201ENST00000624223 323 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AC019226.2-201ENST00000625973 424 ntBASIC2.09□□□□□ -2.07
POLE3Q9NRF9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.09□□□□□ -2.07
POLE3Q9NRF9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
POLE3Q9NRF9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.08□□□□□ -2.08
POLE3Q9NRF9 RNU6-384P-201ENST00000364900 104 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 SNORA20.2-201ENST00000383922 131 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 SNORA67.4-201ENST00000384688 142 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 RNU2-32P-201ENST00000411193 191 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 RNA5SP450-201ENST00000411206 102 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AL031779.1-201ENST00000415663 330 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 RPL21P90-201ENST00000415692 466 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AC009963.1-201ENST00000417265 157 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 HMGB1P31-201ENST00000437242 427 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AC104058.1-201ENST00000448028 297 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AP001486.1-201ENST00000463339 476 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AP001025.1-201ENST00000486139 332 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.08□□□□□ -2.08
POLE3Q9NRF9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
POLE3Q9NRF9 RNA5SP200-201ENST00000516360 103 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 SNORA43.2-201ENST00000516652 128 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AC022616.3-201ENST00000523940 148 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 MTCYBP20-201ENST00000524239 1129 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AP003392.2-201ENST00000527269 208 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.08□□□□□ -2.08
POLE3Q9NRF9 MIR5692A1-201ENST00000580523 69 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AC090897.2-201ENST00000581715 130 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AC008521.1-201ENST00000587471 187 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AL627230.6-201ENST00000611129 280 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AC026585.1-201ENST00000619582 524 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 MIR6132-201ENST00000622083 109 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AC243829.7-201ENST00000633081 225 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 AC099654.13-201ENST00000639774 207 ntBASIC2.08□□□□□ -2.08
POLE3Q9NRF9 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.08□□□□□ -2.08
POLE3Q9NRF9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
POLE3Q9NRF9 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
POLE3Q9NRF9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.07□□□□□ -2.08
POLE3Q9NRF9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
POLE3Q9NRF9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.07□□□□□ -2.08
POLE3Q9NRF9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 207.8 ms