Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
VTA1Q9NP79 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
VTA1Q9NP79 AC138393.1-203ENST00000327086 343 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 RNU6-270P-201ENST00000364131 105 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 XGY1-201ENST00000381172 446 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 RNU6-72P-201ENST00000384285 79 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 RNU6-658P-201ENST00000384606 106 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 SNORD56-201ENST00000413522 71 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 Z99755.1-201ENST00000414048 380 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 HMGN2P20-201ENST00000437531 273 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 AC098831.1-201ENST00000440661 216 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.78□□□□□ -1.8
VTA1Q9NP79 SSXP4-201ENST00000451349 245 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.78□□□□□ -1.8
VTA1Q9NP79 BTF3P15-201ENST00000455606 336 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.78□□□□□ -1.8
VTA1Q9NP79 RNU6-928P-201ENST00000516876 104 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 AP004607.1-201ENST00000524456 203 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.78□□□□□ -1.8
VTA1Q9NP79 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.78□□□□□ -1.8
VTA1Q9NP79 AC005476.1-201ENST00000554427 397 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 FRG2DP-202ENST00000566967 323 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.78□□□□□ -1.8
VTA1Q9NP79 AL356055.1-201ENST00000602528 446 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 AL591516.1-201ENST00000611326 274 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 MIR6134-201ENST00000617606 109 ntBASIC3.78□□□□□ -1.8
VTA1Q9NP79 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.78□□□□□ -1.8
VTA1Q9NP79 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VTA1Q9NP79 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VTA1Q9NP79 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VTA1Q9NP79 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.78□□□□□ -1.8
VTA1Q9NP79 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.78□□□□□ -1.8
VTA1Q9NP79 AL353743.1-202ENST00000431724 1695 ntBASIC3.78□□□□□ -1.81
VTA1Q9NP79 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VTA1Q9NP79 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VTA1Q9NP79 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.77□□□□□ -1.81
VTA1Q9NP79 AC110491.1-201ENST00000562191 2010 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 Y_RNA.58-201ENST00000362807 102 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 Y_RNA.154-201ENST00000363624 102 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 RNY3P1-201ENST00000365085 102 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 RNY3-201ENST00000365484 102 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.77□□□□□ -1.81
VTA1Q9NP79 Y_RNA.490-201ENST00000384413 102 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 RNU6-601P-201ENST00000384540 107 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VTA1Q9NP79 AL445529.1-201ENST00000398713 389 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 AC245054.2-201ENST00000415639 319 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 PGBD4P6-201ENST00000421501 610 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 ARF4P2-201ENST00000430209 526 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.77□□□□□ -1.81
VTA1Q9NP79 HIGD1AP2-201ENST00000446367 280 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 RPL27AP5-201ENST00000469428 449 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 AC109925.1-201ENST00000478069 331 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.77□□□□□ -1.81
VTA1Q9NP79 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.77□□□□□ -1.81
VTA1Q9NP79 RNU6-1170P-201ENST00000515974 106 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 SNORA70.19-201ENST00000516717 90 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.77□□□□□ -1.81
VTA1Q9NP79 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VTA1Q9NP79 H3F3AP1-201ENST00000559984 334 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.77□□□□□ -1.81
VTA1Q9NP79 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.77□□□□□ -1.81
VTA1Q9NP79 VN1R107P-201ENST00000601784 209 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 ELOCP5-201ENST00000604924 333 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 AC135507.2-201ENST00000612443 309 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 AC022149.2-201ENST00000621061 203 ntBASIC3.77□□□□□ -1.81
VTA1Q9NP79 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.77□□□□□ -1.81
VTA1Q9NP79 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VTA1Q9NP79 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VTA1Q9NP79 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.77□□□□□ -1.81
VTA1Q9NP79 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
VTA1Q9NP79 AC233263.6-201ENST00000631132 1963 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.76□□□□□ -1.81
VTA1Q9NP79 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
VTA1Q9NP79 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VTA1Q9NP79 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-37P-201ENST00000362692 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-11P-201ENST00000364234 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 Y_RNA.259-201ENST00000364619 101 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-7-201ENST00000364784 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-8-201ENST00000365467 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-25P-201ENST00000383873 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-1-201ENST00000383898 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-48P-201ENST00000384161 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-36P-201ENST00000384172 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-4P-201ENST00000384205 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-5P-201ENST00000384238 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-3P-201ENST00000384314 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-16P-201ENST00000384385 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-15P-201ENST00000384534 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-2-201ENST00000384627 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-29P-201ENST00000384637 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-9-201ENST00000384776 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 RNU6-33P-201ENST00000384793 107 ntBASIC3.76□□□□□ -1.81
VTA1Q9NP79 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.76□□□□□ -1.81
VTA1Q9NP79 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
VTA1Q9NP79 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.76□□□□□ -1.81
VTA1Q9NP79 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.76□□□□□ -1.81
VTA1Q9NP79 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.76□□□□□ -1.81
VTA1Q9NP79 AC124916.1-201ENST00000444020 547 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms