Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 MIR424-201ENST00000362227 98 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 RNU4-68P-201ENST00000364314 141 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 RNY4P16-201ENST00000364768 94 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 RN7SKP284-201ENST00000411002 343 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 SRIP3-201ENST00000413200 219 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AL008629.1-201ENST00000438615 184 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AC104058.1-201ENST00000448028 297 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 FDX1P2-201ENST00000450769 375 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AL353752.1-201ENST00000454946 260 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AC117532.1-201ENST00000514638 323 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 MIR4307-201ENST00000582802 84 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AC078795.2-201ENST00000602835 1252 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AC174048.1-201ENST00000603389 144 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AL022154.1-201ENST00000604698 785 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AL022345.1-201ENST00000607292 135 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AC135507.2-201ENST00000612443 309 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AC021755.4-201ENST00000616620 456 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 AP000484.1-201ENST00000620067 1252 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 FRG1KP-201ENST00000623592 341 ntBASIC1.45□□□□□ -2.18
VCX3AQ9NNX9 RNU6-1210P-201ENST00000363775 107 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 RNU6-338P-201ENST00000383888 105 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 BTF3L4P2-201ENST00000392798 346 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 CBX3P9-201ENST00000402326 552 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 RPS20P2-201ENST00000402520 389 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 RNU2-23P-201ENST00000410545 195 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 MTCYBP35-201ENST00000503630 1137 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 AC107934.1-201ENST00000522215 217 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 COPS8P3-201ENST00000526024 482 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 MIR1273D-201ENST00000577266 86 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 MIR1254-2-201ENST00000579553 63 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 AC007179.3-201ENST00000604976 235 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 AL670379.2-201ENST00000604983 252 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 AL670379.4-201ENST00000605279 254 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 WWP1P1-201ENST00000466609 2769 ntBASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VCX3AQ9NNX9 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 snoU2_19.1-201ENST00000362361 80 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 RNU6-212P-201ENST00000362642 104 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 RNU6-960P-201ENST00000364056 120 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 SNORD116-20-201ENST00000384529 92 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 MIR10A-201ENST00000385043 110 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 SNORA48.7-201ENST00000391302 135 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 USP9YP18-201ENST00000425912 695 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 AL627311.1-201ENST00000431514 115 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 PTENP1-201ENST00000447117 1215 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 AC027575.1-201ENST00000481064 460 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 RPS29P11-201ENST00000496507 171 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 RPL38P4-201ENST00000502376 214 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 AC112206.3-201ENST00000514578 389 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 RNVU1-2-201ENST00000516326 135 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 RN7SKP256-201ENST00000517201 314 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 AP003122.4-201ENST00000530980 758 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 CYP2C61P-201ENST00000604072 290 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 AC010900.2-201ENST00000604508 210 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 AC013244.3-201ENST00000605614 388 ntBASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.43□□□□□ -2.18
VCX3AQ9NNX9 MIR412-201ENST00000362142 91 ntBASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 RNU4-92P-201ENST00000363783 136 ntBASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 SNORD14B-201ENST00000364533 90 ntBASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 RNU6-439P-201ENST00000384188 106 ntBASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 MIR128-1-201ENST00000384921 82 ntBASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 MIR9-3-201ENST00000385084 90 ntBASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 MIR30A-201ENST00000385092 71 ntBASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 RNA5SP100-201ENST00000410903 110 ntBASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 RNA5SP59-201ENST00000410922 110 ntBASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 RPL23AP30-201ENST00000432419 501 ntBASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.42□□□□□ -2.18
VCX3AQ9NNX9 AC096638.1-201ENST00000444678 216 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms