Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC010975.2-201ENST00000427781 588 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 AL671855.1-201ENST00000446875 1203 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 AC003071.1-201ENST00000451219 789 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 AP001324.2-201ENST00000461163 319 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 AC011005.2-201ENST00000487324 359 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 AC091133.4-201ENST00000511142 308 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 RNU5F-8P-201ENST00000515941 111 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 RNU1-86P-201ENST00000516108 154 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 RNU1-107P-201ENST00000516617 154 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 ACA59.2-201ENST00000517061 156 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 AC106782.4-201ENST00000568264 210 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 AC010378.1-201ENST00000619270 362 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 AL160394.1-201ENST00000624765 724 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 OR5AK4P-201ENST00000635912 903 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 MIR6863-201ENST00000636112 90 ntBASIC2.41□□□□□ -2.02
VIPAS39Q9H9C1 CDC27P3-201ENST00000635418 1910 ntBASIC2.4□□□□□ -2.02
VIPAS39Q9H9C1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 AC009487.4-201ENST00000624969 3585 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-461P-201ENST00000364195 107 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 SNORD14B-201ENST00000364533 90 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 Y_RNA.517-201ENST00000384551 106 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 MIR491-201ENST00000384877 84 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 MIR27B-201ENST00000385129 97 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 RNU2-16P-201ENST00000410712 136 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 AL627311.1-201ENST00000431514 115 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 AC104389.3-201ENST00000445629 235 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 RPL23AP45-201ENST00000476406 468 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 MTCO3P9-201ENST00000506989 781 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 AC096725.1-201ENST00000514266 313 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 SNORD19.2-201ENST00000516978 73 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 MTCYBP33-201ENST00000575007 1130 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 MIR5692A1-201ENST00000580523 69 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 MIR3117-201ENST00000584034 78 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 AC004223.2-201ENST00000590309 544 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 AC093732.2-201ENST00000607950 274 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 AL354950.2-201ENST00000617939 290 ntBASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.4□□□□□ -2.03
VIPAS39Q9H9C1 MTND4P1-201ENST00000457501 1466 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AL365361.1-201ENST00000566942 3481 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 OR56A5-201ENST00000340110 738 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-1303P-201ENST00000364841 107 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-1103P-201ENST00000384150 107 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-45P-201ENST00000384471 107 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-606P-201ENST00000384721 111 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 COTL1P1-201ENST00000422309 375 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 VN1R108P-201ENST00000431580 830 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 RNU7-63P-201ENST00000459054 62 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AC026801.1-201ENST00000497178 464 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 HMGB1P29-201ENST00000505659 499 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 MTND2P33-201ENST00000506452 1031 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AC114781.4-201ENST00000513707 639 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AC022080.3-201ENST00000544433 482 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 BNIP3P6-201ENST00000549284 499 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AC105137.2-201ENST00000569073 466 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 NRBF2P5-201ENST00000603087 788 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AL136363.2-201ENST00000604173 851 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AL161756.2-201ENST00000604597 246 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AP001596.2-201ENST00000608410 312 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AL442067.2-201ENST00000614033 363 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
VIPAS39Q9H9C1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 Y_RNA.41-201ENST00000362646 102 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AL360182.1-201ENST00000397433 468 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 RPS4XP8-201ENST00000402039 771 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 CIR1P3-201ENST00000405137 479 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AL513475.1-201ENST00000406602 315 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms