Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 U2.12-201ENST00000613778 191 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 U2.20-201ENST00000613956 192 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 U2.9-201ENST00000615427 191 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 U2.11-201ENST00000616345 191 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 U2.2-201ENST00000616535 191 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 U2.3-201ENST00000617785 191 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 U6.42-201ENST00000618440 107 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 U2.19-201ENST00000618602 191 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 RNU2-1-201ENST00000618664 191 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 U2.6-201ENST00000619225 191 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 U2.5-201ENST00000619465 191 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 U2.10-201ENST00000620268 191 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 YWHAEP7-203ENST00000622054 312 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 AC090517.3-201ENST00000625170 141 ntBASIC1.97□□□□□ -2.09
LRRC40Q9H9A6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 SNORD3E-201ENST00000362899 217 ntBASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 RNU6-942P-201ENST00000363002 107 ntBASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 SNORD56.2-201ENST00000363242 71 ntBASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 RNU6-533P-201ENST00000384144 107 ntBASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 RNU6-72P-201ENST00000384285 79 ntBASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 SUMO2P12-201ENST00000405924 140 ntBASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 AC006512.1-201ENST00000468816 291 ntBASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 ANXA2P1-201ENST00000505539 926 ntBASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 AF131216.2-201ENST00000512316 564 ntBASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 OR5AL2P-201ENST00000532185 920 ntBASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 CR383656.8-201ENST00000549046 145 ntBASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 AL773524.1-201ENST00000614065 229 ntBASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.96□□□□□ -2.1
LRRC40Q9H9A6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 HAUS6P2-201ENST00000433254 2404 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 SNORD115-3-201ENST00000363100 82 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 RNU6-487P-201ENST00000365430 104 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 MIR10A-201ENST00000385043 110 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 GSTA9P-201ENST00000406231 611 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 RPL22P18-201ENST00000417197 377 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AL158823.1-201ENST00000418441 478 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 EIF1AXP1-201ENST00000419267 435 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AP000797.1-201ENST00000478870 387 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 RNA5SP337-201ENST00000517007 109 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 ADI1P3-201ENST00000549509 470 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 ANP32BP3-201ENST00000559213 706 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AL354943.1-201ENST00000572103 781 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 TMF1P1-201ENST00000576058 373 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 TUSC7.1-201ENST00000610969 165 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AC005296.1-201ENST00000616145 209 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 AL078595.3-201ENST00000623815 1166 ntBASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
LRRC40Q9H9A6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 SNORD115.1-201ENST00000391109 76 ntBASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 AC137499.1-201ENST00000427602 88 ntBASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 AC119618.1-201ENST00000434191 222 ntBASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 NDUFB1P2-201ENST00000449477 176 ntBASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 AC091965.2-201ENST00000512324 613 ntBASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 AC112206.3-201ENST00000514578 389 ntBASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 CYCSP27-201ENST00000527643 293 ntBASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 AP000763.2-201ENST00000540641 163 ntBASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 AC091544.4-201ENST00000555268 342 ntBASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 AC091489.2-201ENST00000566263 604 ntBASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 DEFB131E-202ENST00000602581 683 ntBASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 SNRPGP19-201ENST00000603826 189 ntBASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 AL138889.2-201ENST00000603883 242 ntBASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.94□□□□□ -2.1
LRRC40Q9H9A6 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 RNU6-655P-201ENST00000362858 107 ntBASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 SNORD113-6-201ENST00000363345 75 ntBASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 RNU6-529P-201ENST00000363383 104 ntBASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 SNORD116-20-201ENST00000384529 92 ntBASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 AL356432.1-201ENST00000405809 419 ntBASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 RNU2-32P-201ENST00000411193 191 ntBASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 HSFY7P-201ENST00000432672 318 ntBASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 HSFY8P-201ENST00000437934 318 ntBASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 CALM1P1-201ENST00000442082 433 ntBASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms