Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 AC109927.2-201ENST00000506416 303 ntBASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 Y_RNA.672-201ENST00000516289 104 ntBASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 RNU6-1315P-201ENST00000517187 99 ntBASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 AC087241.2-201ENST00000535801 324 ntBASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 MIR4782-201ENST00000577987 79 ntBASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 AC007229.1-201ENST00000590455 412 ntBASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 AC012360.2-201ENST00000609349 391 ntBASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RPAP3Q9H6T3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 RNU6-1159P-201ENST00000362933 107 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 RNU4-52P-201ENST00000384209 138 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 RNU6-19P-201ENST00000384718 107 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 AC027124.2-201ENST00000428249 105 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 AP001324.2-201ENST00000461163 319 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 KLF3P2-201ENST00000465138 268 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 AC010486.2-201ENST00000505572 483 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 RNU2-46P-201ENST00000517038 113 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 AC060788.1-201ENST00000521318 469 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 MIR5002-201ENST00000584713 97 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 AC005771.1-201ENST00000585581 349 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 DEFB131E-202ENST00000602581 683 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 AL451064.1-201ENST00000607718 471 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 AC126118.1-201ENST00000607744 628 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 MIR6134-201ENST00000617606 109 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 AL162373.1-201ENST00000620433 407 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 AC091931.1-201ENST00000623488 728 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 AC091932.3-201ENST00000624223 323 ntBASIC2.34□□□□□ -2.03
RPAP3Q9H6T3 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.04
RPAP3Q9H6T3 CDC27P3-201ENST00000635418 1910 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AC073343.1-201ENST00000328239 651 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 SNORA16B-201ENST00000364674 135 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 RNY4P34-201ENST00000364779 95 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 RNU6-1280P-201ENST00000365211 107 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 SNORA75B-201ENST00000384053 137 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 MIR583-201ENST00000384846 75 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 MIR147B-201ENST00000390185 80 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 RPL23AP32-201ENST00000395315 459 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AC019129.1-201ENST00000403786 261 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 PTGES3P4-201ENST00000426243 356 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AC104850.1-201ENST00000435940 476 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 FABP5P14-201ENST00000437273 393 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 RPL7P54-201ENST00000438336 674 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 DYNLL1P5-201ENST00000467158 270 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 RAP1BP2-201ENST00000478270 544 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AC011005.2-201ENST00000487324 359 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 MIR892C-201ENST00000516410 77 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 RN7SKP219-201ENST00000516825 296 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 SCARNA3-201ENST00000517097 143 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AK6P1-201ENST00000540219 478 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AL157871.3-201ENST00000557231 293 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 LINC00933-203ENST00000559812 219 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 MIR1273C-201ENST00000578669 77 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 MIR4765-201ENST00000585007 77 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AL021997.1-201ENST00000605757 193 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AC091304.9-201ENST00000612091 226 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AC120349.3-201ENST00000624377 529 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 AC025048.6-202ENST00000627667 438 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 CKAP2P1-201ENST00000555477 2049 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 TEX21P-201ENST00000447107 1476 ntBASIC2.33□□□□□ -2.04
RPAP3Q9H6T3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.32□□□□□ -2.04
RPAP3Q9H6T3 SNORA40C-201ENST00000391285 128 ntBASIC2.32□□□□□ -2.04
RPAP3Q9H6T3 RN7SKP158-201ENST00000410453 326 ntBASIC2.32□□□□□ -2.04
RPAP3Q9H6T3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.32□□□□□ -2.04
RPAP3Q9H6T3 RPL7P34-201ENST00000433316 712 ntBASIC2.32□□□□□ -2.04
RPAP3Q9H6T3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.32□□□□□ -2.04
RPAP3Q9H6T3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms