Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNU6-362P-201ENST00000516736 90 ntBASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 AC008015.1-201ENST00000555505 465 ntBASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 AC034229.4-201ENST00000607861 441 ntBASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 AC096772.1-201ENST00000609146 564 ntBASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 AC231657.1-201ENST00000624313 397 ntBASIC1.54□□□□□ -2.16
UPF3BQ9BZI7 Y_RNA.205-201ENST00000364128 113 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 RNU1-93P-201ENST00000364704 169 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 RNU6-1280P-201ENST00000365211 107 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 ERHP2-201ENST00000402323 299 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 AL591034.2-201ENST00000402839 359 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 TIMM9P2-201ENST00000419324 266 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 AC090821.2-201ENST00000523552 176 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 DEFB131D-201ENST00000526803 184 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 AL160236.1-201ENST00000556317 195 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 AC011712.1-201ENST00000588959 234 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 AC021755.4-201ENST00000616620 456 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 AP000676.3-201ENST00000623299 569 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 AL133216.2-202ENST00000634512 349 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 AC097655.1-201ENST00000635075 318 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 AC006927.2-201ENST00000639256 389 ntBASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
UPF3BQ9BZI7 MIR96-201ENST00000362288 78 ntBASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 RNU1-23P-201ENST00000363361 144 ntBASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 MIR150-201ENST00000385048 84 ntBASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 AL359634.1-202ENST00000404721 284 ntBASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 KATNBL1P3-201ENST00000443475 909 ntBASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 RNU6-678P-201ENST00000516832 109 ntBASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 AC109329.1-201ENST00000518744 317 ntBASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 DUXAP5-201ENST00000529668 529 ntBASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 AC087897.1-201ENST00000550134 156 ntBASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 AL133153.1-201ENST00000557756 303 ntBASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 AC126365.2-201ENST00000580630 379 ntBASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 MIR151B-201ENST00000584249 96 ntBASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 AC021171.1-201ENST00000603137 706 ntBASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 AL356094.1-201ENST00000624663 1212 ntBASIC1.52□□□□□ -2.17
UPF3BQ9BZI7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 RNU1-22P-201ENST00000363334 158 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 RNU6-744P-201ENST00000365557 107 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 RNU6-1316P-201ENST00000384242 108 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 MIR30A-201ENST00000385092 71 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 OR51A5P-201ENST00000415429 942 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 MTCO3P46-201ENST00000425787 232 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 AC104651.1-201ENST00000427559 735 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 AC011005.2-201ENST00000487324 359 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 RPS3AP22-201ENST00000488297 769 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 FAM206BP-201ENST00000510179 541 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 RNU6-334P-201ENST00000517072 102 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 OR8K2P-201ENST00000524645 927 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 IMMP1LP2-201ENST00000552954 492 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 FAM106DP-201ENST00000586416 501 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 AC010900.2-201ENST00000604508 210 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 NDUFA8P1-201ENST00000605525 367 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 AL133445.2-201ENST00000611191 527 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 MIR6788-201ENST00000618842 66 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 AC068880.4-201ENST00000623082 495 ntBASIC1.51□□□□□ -2.17
UPF3BQ9BZI7 ZNF680P1-201ENST00000436625 1469 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 RNU5B-4P-201ENST00000363508 111 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 RNU6-611P-201ENST00000384276 104 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 MIR520E-201ENST00000384867 87 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 MTND5P25-201ENST00000430499 799 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 ELOCP30-201ENST00000447108 299 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 AC017099.1-201ENST00000448261 1028 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 AC023194.1-201ENST00000493084 308 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 AC021146.2-201ENST00000504736 556 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 AC021451.1-201ENST00000523498 1129 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 AC136619.2-201ENST00000563361 631 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 AL356432.3-201ENST00000568952 465 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 MIR4782-201ENST00000577987 79 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.5□□□□□ -2.17
UPF3BQ9BZI7 AP003485.1-201ENST00000625093 753 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms