Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC002400.1-201ENST00000569310 726 ntBASIC0.64□□□□□ -2.31
SCAPERQ9BY12 SNORD39.3-201ENST00000584451 71 ntBASIC0.64□□□□□ -2.31
SCAPERQ9BY12 AP005229.2-201ENST00000609980 697 ntBASIC0.64□□□□□ -2.31
SCAPERQ9BY12 AC084824.5-201ENST00000612009 413 ntBASIC0.64□□□□□ -2.31
SCAPERQ9BY12 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.64□□□□□ -2.31
SCAPERQ9BY12 Z75746.1-201ENST00000440243 2080 ntBASIC0.63□□□□□ -2.31
SCAPERQ9BY12 MTND4P16-201ENST00000466108 1367 ntBASIC0.63□□□□□ -2.31
SCAPERQ9BY12 Y_RNA.280-201ENST00000364765 112 ntBASIC0.63□□□□□ -2.31
SCAPERQ9BY12 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.63□□□□□ -2.31
SCAPERQ9BY12 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SCAPERQ9BY12 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.63□□□□□ -2.31
SCAPERQ9BY12 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.63□□□□□ -2.31
SCAPERQ9BY12 AC125611.1-201ENST00000549563 229 ntBASIC0.63□□□□□ -2.31
SCAPERQ9BY12 AL391516.1-201ENST00000554380 2449 ntBASIC0.62□□□□□ -2.31
SCAPERQ9BY12 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SCAPERQ9BY12 RNA5SP327-201ENST00000362494 101 ntBASIC0.62□□□□□ -2.31
SCAPERQ9BY12 SNORA50A-201ENST00000384225 134 ntBASIC0.62□□□□□ -2.31
SCAPERQ9BY12 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.62□□□□□ -2.31
SCAPERQ9BY12 AC025465.3-201ENST00000510570 311 ntBASIC0.62□□□□□ -2.31
SCAPERQ9BY12 SNORA62.5-201ENST00000516634 120 ntBASIC0.62□□□□□ -2.31
SCAPERQ9BY12 AC091152.3-201ENST00000604227 325 ntBASIC0.62□□□□□ -2.31
SCAPERQ9BY12 AL078604.3-201ENST00000615580 211 ntBASIC0.62□□□□□ -2.31
SCAPERQ9BY12 MTND1P37-201ENST00000636562 264 ntBASIC0.62□□□□□ -2.31
SCAPERQ9BY12 MTCO1P23-201ENST00000415223 1526 ntBASIC0.61□□□□□ -2.31
SCAPERQ9BY12 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
SCAPERQ9BY12 RNU6-26P-201ENST00000383985 107 ntBASIC0.61□□□□□ -2.31
SCAPERQ9BY12 AC013410.2-201ENST00000422627 201 ntBASIC0.61□□□□□ -2.31
SCAPERQ9BY12 MTCO1P44-201ENST00000441935 243 ntBASIC0.61□□□□□ -2.31
SCAPERQ9BY12 RPL23AP35-201ENST00000451906 501 ntBASIC0.61□□□□□ -2.31
SCAPERQ9BY12 AP001324.2-201ENST00000461163 319 ntBASIC0.61□□□□□ -2.31
SCAPERQ9BY12 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.61□□□□□ -2.31
SCAPERQ9BY12 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.61□□□□□ -2.31
SCAPERQ9BY12 AL132857.1-201ENST00000555180 708 ntBASIC0.61□□□□□ -2.31
SCAPERQ9BY12 ELOCP5-201ENST00000604924 333 ntBASIC0.61□□□□□ -2.31
SCAPERQ9BY12 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.61□□□□□ -2.31
SCAPERQ9BY12 AC091965.5-201ENST00000624785 342 ntBASIC0.61□□□□□ -2.31
SCAPERQ9BY12 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.61□□□□□ -2.31
SCAPERQ9BY12 ENSAP3-201ENST00000312710 333 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 SNORA51.6-201ENST00000384151 125 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 SNORA29-201ENST00000384183 140 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 RNU6-439P-201ENST00000384188 106 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 AL117342.1-201ENST00000404861 406 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 RNA5SP100-201ENST00000410903 110 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 RNA5SP59-201ENST00000410922 110 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.6□□□□□ -2.31
SCAPERQ9BY12 USP9YP26-201ENST00000421008 661 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 USP9YP18-201ENST00000425912 695 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.6□□□□□ -2.31
SCAPERQ9BY12 AC007919.1-201ENST00000429380 217 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.6□□□□□ -2.31
SCAPERQ9BY12 USP9YP17-201ENST00000444617 696 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 AC245102.2-201ENST00000448956 180 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 AL157398.1-201ENST00000452981 186 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.6□□□□□ -2.31
SCAPERQ9BY12 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.6□□□□□ -2.31
SCAPERQ9BY12 RNU4-57P-201ENST00000515980 135 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.6□□□□□ -2.31
SCAPERQ9BY12 AC012414.6-201ENST00000568241 401 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.6□□□□□ -2.31
SCAPERQ9BY12 AC004492.1-201ENST00000607036 742 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.6□□□□□ -2.31
SCAPERQ9BY12 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.6□□□□□ -2.31
SCAPERQ9BY12 MTND4P12-201ENST00000498999 1377 ntBASIC0.6□□□□□ -2.31
SCAPERQ9BY12 SNORD1A-201ENST00000364968 72 ntBASIC0.59□□□□□ -2.31
SCAPERQ9BY12 RNU1-36P-201ENST00000365130 165 ntBASIC0.59□□□□□ -2.31
SCAPERQ9BY12 AL591034.2-201ENST00000402839 359 ntBASIC0.59□□□□□ -2.31
SCAPERQ9BY12 RNU2-33P-201ENST00000410344 192 ntBASIC0.59□□□□□ -2.31
SCAPERQ9BY12 AC078974.1-201ENST00000411597 223 ntBASIC0.59□□□□□ -2.31
SCAPERQ9BY12 RPS27P16-201ENST00000425758 201 ntBASIC0.59□□□□□ -2.31
SCAPERQ9BY12 AC244505.3-201ENST00000454598 187 ntBASIC0.59□□□□□ -2.31
SCAPERQ9BY12 RPS27P22-201ENST00000478056 241 ntBASIC0.59□□□□□ -2.31
SCAPERQ9BY12 AC134050.1-201ENST00000495088 933 ntBASIC0.59□□□□□ -2.31
SCAPERQ9BY12 CENPUP1-201ENST00000526649 1202 ntBASIC0.59□□□□□ -2.31
SCAPERQ9BY12 MIR3167-201ENST00000579623 85 ntBASIC0.59□□□□□ -2.31
SCAPERQ9BY12 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.58□□□□□ -2.32
SCAPERQ9BY12 RNU1-124P-201ENST00000363861 145 ntBASIC0.58□□□□□ -2.32
SCAPERQ9BY12 RNU4-67P-201ENST00000364569 141 ntBASIC0.58□□□□□ -2.32
SCAPERQ9BY12 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
SCAPERQ9BY12 MTCYBP32-201ENST00000427945 1084 ntBASIC0.58□□□□□ -2.32
SCAPERQ9BY12 SNRPEP7-201ENST00000438350 220 ntBASIC0.58□□□□□ -2.32
SCAPERQ9BY12 RPL36AP48-201ENST00000485521 314 ntBASIC0.58□□□□□ -2.32
SCAPERQ9BY12 COX7A2P2-201ENST00000505291 250 ntBASIC0.58□□□□□ -2.32
SCAPERQ9BY12 ACA64.5-201ENST00000516207 127 ntBASIC0.58□□□□□ -2.32
SCAPERQ9BY12 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.58□□□□□ -2.32
SCAPERQ9BY12 CYCSP27-201ENST00000527643 293 ntBASIC0.58□□□□□ -2.32
SCAPERQ9BY12 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.58□□□□□ -2.32
SCAPERQ9BY12 ADAM3B-201ENST00000569937 840 ntBASIC0.58□□□□□ -2.32
SCAPERQ9BY12 AC090079.2-201ENST00000575289 768 ntBASIC0.58□□□□□ -2.32
SCAPERQ9BY12 7SK.7-201ENST00000603504 247 ntBASIC0.58□□□□□ -2.32
SCAPERQ9BY12 AL365204.3-201ENST00000612448 685 ntBASIC0.58□□□□□ -2.32
SCAPERQ9BY12 RNU6-35P-201ENST00000384530 107 ntBASIC0.57□□□□□ -2.32
SCAPERQ9BY12 MIR597-201ENST00000384968 97 ntBASIC0.57□□□□□ -2.32
SCAPERQ9BY12 AL121978.1-201ENST00000402778 359 ntBASIC0.57□□□□□ -2.32
SCAPERQ9BY12 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.57□□□□□ -2.32
SCAPERQ9BY12 GTF2IP12-201ENST00000456547 356 ntBASIC0.57□□□□□ -2.32
SCAPERQ9BY12 HAR1A.1-201ENST00000459583 118 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms