Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 MTATP6P7-201ENST00000453315 681 ntBASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 AC010099.1-201ENST00000455434 375 ntBASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 BX510359.1-201ENST00000456973 237 ntBASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 AC092798.1-201ENST00000458542 409 ntBASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 AC104136.1-201ENST00000512969 394 ntBASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 Y_RNA.704-201ENST00000516851 102 ntBASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 SNORD60.2-201ENST00000516883 86 ntBASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 AL137161.1-201ENST00000532231 390 ntBASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 AP000867.2-201ENST00000532468 320 ntBASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 MIR5692A1-201ENST00000580523 69 ntBASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 MIR548AC-201ENST00000585049 88 ntBASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 AC024940.5-201ENST00000622889 474 ntBASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 U2.21-201ENST00000637295 81 ntBASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC28BQ9BUN5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.4□□□□□ -2.02
CCDC28BQ9BUN5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
CCDC28BQ9BUN5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CCDC28BQ9BUN5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
CCDC28BQ9BUN5 SNORA71.3-201ENST00000362582 128 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 Y_RNA.33-201ENST00000362591 102 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 RNY3P3-201ENST00000363816 102 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 RNU6-371P-201ENST00000364283 108 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 Y_RNA.453-201ENST00000384223 109 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 SNORD115-47-201ENST00000391226 86 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 EEF1A1P40-201ENST00000412883 573 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 NDUFS5P4-201ENST00000412983 318 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 HMGB1P9-201ENST00000429856 646 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 RPL12P25-201ENST00000455592 494 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 RNU7-180P-201ENST00000459240 63 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 MRPL42P6-201ENST00000486397 371 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AC091885.1-201ENST00000506658 268 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AC096725.1-201ENST00000514266 313 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 RNU6-703P-201ENST00000516946 107 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AC093732.2-201ENST00000607950 274 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AC104458.1-201ENST00000608243 463 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 DISC2.1-201ENST00000612827 205 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AC007014.2-201ENST00000615581 479 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 AL354685.2-201ENST00000448218 1447 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 HSPA8P4-201ENST00000511877 1920 ntBASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC28BQ9BUN5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 AL365361.1-201ENST00000566942 3481 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 MIR21-201ENST00000362134 72 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 Y_RNA.89-201ENST00000363031 102 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 RNU6-778P-201ENST00000363269 103 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 RNU6-1090P-201ENST00000364065 94 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 AL360182.1-201ENST00000397433 468 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 UBE2V1P2-201ENST00000397758 440 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 MYL8P-204ENST00000431574 518 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 GTF2IP20-201ENST00000431663 360 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 AL714022.1-201ENST00000439897 151 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 snoU13.28-201ENST00000459235 104 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 RPL38P4-201ENST00000502376 214 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 RNA5SP401-201ENST00000515920 127 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 RNU4-29P-201ENST00000515943 174 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 RNU6-718P-201ENST00000516166 105 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 AC009902.1-201ENST00000519351 183 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 MTND1P35-201ENST00000526739 508 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 AC022080.3-201ENST00000544433 482 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 NACAP3-201ENST00000552100 481 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 AC078814.3-201ENST00000553036 491 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 AL138976.2-201ENST00000563989 694 ntBASIC2.39□□□□□ -2.03
CCDC28BQ9BUN5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms