Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 SUMO1P2-201ENST00000452524 304 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 AC006026.2-201ENST00000457376 180 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 RNA5SP246-201ENST00000458909 119 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 U8.22-201ENST00000459141 133 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 TOMM22P6-201ENST00000465035 409 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 RN7SL604P-201ENST00000492589 296 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 RNU1-103P-201ENST00000516502 125 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 AP004607.1-201ENST00000524456 203 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 AC107016.1-201ENST00000550463 337 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 LINC00933-203ENST00000559812 219 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 HSPE1P5-201ENST00000561489 272 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 AC024153.1-201ENST00000603103 365 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 FTX_3.1-201ENST00000610451 147 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 AC233981.2-201ENST00000611524 1614 ntBASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PTCHD1Q96NR3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 USP8P1-201ENST00000494673 3183 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 SNORD27-201ENST00000363981 72 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 RNU6-217P-201ENST00000384164 104 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 SNORD115-46-201ENST00000390982 71 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 PPIAP31-201ENST00000405422 495 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 AL358453.1-201ENST00000422522 250 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 AC004975.1-201ENST00000428733 208 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 AL591043.1-201ENST00000432461 424 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 VDAC1P3-201ENST00000434069 851 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 BX679664.1-201ENST00000434429 253 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 AC004383.1-201ENST00000438135 289 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 SUMO1P3-201ENST00000439961 304 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 MTATP6P7-201ENST00000453315 681 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 snoU13.30-201ENST00000458951 104 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 RNU6-1282P-201ENST00000516735 96 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 IFITM8P-201ENST00000522529 394 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 AC069240.1-201ENST00000548774 375 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 H3F3AP1-201ENST00000559984 334 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 AC007224.1-201ENST00000564410 144 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 ZNF192P1-203ENST00000565888 810 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 MIR376A1-201ENST00000616574 68 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 MIR7702-201ENST00000621931 59 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 AC097372.5-201ENST00000623665 376 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 AC241585.2-209ENST00000638217 143 ntBASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.89□□□□□ -1.79
PTCHD1Q96NR3 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 AL391987.6-201ENST00000305671 199 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 MIR335-201ENST00000362173 94 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 snoU2_19.2-201ENST00000363024 80 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 Y_RNA.237-201ENST00000364439 102 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 MIR93-201ENST00000385024 80 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 RNA5SP317-201ENST00000410176 116 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 RNA5SP311-201ENST00000411290 116 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 AL590135.1-201ENST00000422215 156 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 AC006011.1-201ENST00000442758 349 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 RPL21P104-201ENST00000464143 478 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 RNA5SP315-201ENST00000516340 116 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 RNA5SP309-201ENST00000516670 106 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 RNA5SP312-201ENST00000517068 116 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 MIR2116-201ENST00000517221 80 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 MRPS36P4-201ENST00000534436 298 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 AC090617.3-201ENST00000573670 475 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 AC136932.1-201ENST00000574771 208 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 MIR4300-201ENST00000581016 96 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 ZYXP1-201ENST00000617638 118 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 U2.21-201ENST00000637295 81 ntBASIC3.88□□□□□ -1.79
PTCHD1Q96NR3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms