Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU6-384P-201ENST00000364900 104 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 SNORA51.11-201ENST00000384442 131 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 RNU6-456P-201ENST00000384493 107 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 RNU6-658P-201ENST00000384606 106 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 MIR518D-201ENST00000385014 87 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 RNU6-750P-201ENST00000390946 107 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 RNU2-68P-201ENST00000410878 191 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC096664.2-201ENST00000411843 406 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC016831.2-201ENST00000417179 352 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AL353729.1-201ENST00000425044 720 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC00477Q96M19 GPR143P-201ENST00000434155 205 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 RPS15AP5-201ENST00000436276 388 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC00477Q96M19 AL031659.1-201ENST00000447075 539 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 TPTE2P5-203ENST00000458118 728 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC080013.2-201ENST00000460866 323 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AL121769.1-201ENST00000469473 401 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC126389.1-201ENST00000477436 290 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC079804.2-201ENST00000490376 200 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC116562.3-201ENST00000506136 177 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC105313.1-201ENST00000509121 353 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC112206.3-201ENST00000514578 389 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 RNA5SP356-201ENST00000515972 94 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 RNU1-86P-201ENST00000516108 154 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 RNU6-581P-201ENST00000516214 105 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 RNU1-107P-201ENST00000516617 154 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 RNU6-405P-201ENST00000516637 110 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC068587.5-201ENST00000528506 175 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AP005435.4-201ENST00000529514 284 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LINC00477Q96M19 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.73□□□□□ -2.13
LINC00477Q96M19 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC00477Q96M19 MIR5007-201ENST00000583098 95 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 NRBF2P1-201ENST00000587407 859 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC092954.2-201ENST00000609103 430 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 DUSP12P1-201ENST00000612874 516 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 MIR6817-201ENST00000615588 66 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AL162373.1-201ENST00000620433 407 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 SDR42E1P4-201ENST00000620894 481 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.73□□□□□ -2.13
LINC00477Q96M19 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.73□□□□□ -2.13
LINC00477Q96M19 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.73□□□□□ -2.13
LINC00477Q96M19 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
LINC00477Q96M19 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.72□□□□□ -2.13
LINC00477Q96M19 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
LINC00477Q96M19 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.72□□□□□ -2.13
LINC00477Q96M19 NACAP2-201ENST00000318548 624 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC062016.1-201ENST00000355719 319 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 SNORA80A-201ENST00000363922 136 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 RNU6-371P-201ENST00000364283 108 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
LINC00477Q96M19 RNU4-52P-201ENST00000384209 138 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 RNU6-166P-201ENST00000384371 107 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
LINC00477Q96M19 SNORA46.1-201ENST00000391069 153 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 CALM2P3-201ENST00000400429 449 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 U3.37-201ENST00000408528 213 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 RNU6-1025P-201ENST00000410629 104 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 USP9YP27-201ENST00000418455 438 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC00477Q96M19 PIGFP2-201ENST00000421400 651 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 NUP35P1-201ENST00000422734 947 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 MTCYBP8-201ENST00000422855 651 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AL160275.3-201ENST00000423876 471 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 EIF4EP4-201ENST00000424916 578 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 MTCO3P5-201ENST00000433620 714 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC124916.1-201ENST00000444020 547 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AL583843.1-201ENST00000456070 346 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 SNRPFP4-201ENST00000456366 242 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 RPL26P9-201ENST00000457466 433 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC090255.1-201ENST00000495779 349 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC108078.1-201ENST00000508073 725 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC00477Q96M19 RNA5SP148-201ENST00000516527 94 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 RNU6-572P-201ENST00000516724 80 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 RNU6-1183P-201ENST00000517054 60 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 SNORA31.19-201ENST00000517079 126 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 RNU6-685P-201ENST00000517088 95 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 RNU6-1315P-201ENST00000517187 99 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 RPL7P20-201ENST00000520308 745 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC011979.2-201ENST00000527568 352 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC010186.2-204ENST00000537668 439 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC027176.1-201ENST00000560204 514 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AL391840.1-201ENST00000571144 367 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.72□□□□□ -2.13
LINC00477Q96M19 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC078795.2-201ENST00000602835 1252 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 AC245014.2-201ENST00000603689 287 ntBASIC1.72□□□□□ -2.13
LINC00477Q96M19 BNIP3P9-201ENST00000603714 553 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms