Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 MTND1P20-201ENST00000430341 950 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 AC004854.1-201ENST00000440356 349 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 AL441985.1-201ENST00000457727 251 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 RPL22P13-201ENST00000493291 347 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 AF213884.2-201ENST00000510417 903 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 OR5AQ1P-201ENST00000527596 927 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.01□□□□□ -2.09
USP47Q96K76 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.01□□□□□ -2.09
USP47Q96K76 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.01□□□□□ -2.09
USP47Q96K76 AC012213.3-201ENST00000577199 777 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 MIR4782-201ENST00000577987 79 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 MIR4307-201ENST00000582802 84 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 AL161423.1-201ENST00000613700 262 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
USP47Q96K76 AC024581.2-201ENST00000619986 252 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.01□□□□□ -2.09
USP47Q96K76 Z75746.1-201ENST00000440243 2080 ntBASIC2.01□□□□□ -2.09
USP47Q96K76 Y_RNA.46-201ENST00000362695 102 ntBASIC2□□□□□ -2.09
USP47Q96K76 RNU6-925P-201ENST00000384629 104 ntBASIC2□□□□□ -2.09
USP47Q96K76 SNORD23.1-201ENST00000408212 104 ntBASIC2□□□□□ -2.09
USP47Q96K76 RN7SKP158-201ENST00000410453 326 ntBASIC2□□□□□ -2.09
USP47Q96K76 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2□□□□□ -2.09
USP47Q96K76 MTND1P32-201ENST00000433043 938 ntBASIC2□□□□□ -2.09
USP47Q96K76 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2□□□□□ -2.09
USP47Q96K76 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2□□□□□ -2.09
USP47Q96K76 AKIRIN2P1-201ENST00000505898 352 ntBASIC2□□□□□ -2.09
USP47Q96K76 Y_RNA.675-201ENST00000516389 149 ntBASIC2□□□□□ -2.09
USP47Q96K76 RNA5SP102-201ENST00000516865 106 ntBASIC2□□□□□ -2.09
USP47Q96K76 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2□□□□□ -2.09
USP47Q96K76 MIR3146-201ENST00000580367 79 ntBASIC2□□□□□ -2.09
USP47Q96K76 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2□□□□□ -2.09
USP47Q96K76 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2□□□□□ -2.09
USP47Q96K76 AC034229.4-201ENST00000607861 441 ntBASIC2□□□□□ -2.09
USP47Q96K76 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2□□□□□ -2.09
USP47Q96K76 AL359740.1-201ENST00000624340 592 ntBASIC2□□□□□ -2.09
USP47Q96K76 Z99571.1-201ENST00000636677 394 ntBASIC2□□□□□ -2.09
USP47Q96K76 AC006927.4-201ENST00000639187 543 ntBASIC2□□□□□ -2.09
USP47Q96K76 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2□□□□□ -2.09
USP47Q96K76 AL355497.1-201ENST00000406262 551 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 AC106883.1-201ENST00000418805 562 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.99□□□□□ -2.09
USP47Q96K76 AC093106.2-201ENST00000428212 385 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 RPS15AP9-201ENST00000439856 381 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.99□□□□□ -2.09
USP47Q96K76 RNU6-953P-201ENST00000459154 107 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 AC011005.2-201ENST00000487324 359 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 HMGN1P7-201ENST00000491722 313 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.99□□□□□ -2.09
USP47Q96K76 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.99□□□□□ -2.09
USP47Q96K76 MRPS33P3-201ENST00000513456 322 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 SMURF2P1-201ENST00000514992 481 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 RNU7-193P-201ENST00000516723 65 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 RNU6-572P-201ENST00000516724 80 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 AC009902.1-201ENST00000519351 183 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 MTATP6P15-201ENST00000527233 835 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.99□□□□□ -2.09
USP47Q96K76 MTND4P33-201ENST00000556706 766 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.99□□□□□ -2.09
USP47Q96K76 AL138976.2-201ENST00000563989 694 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 TMF1P1-201ENST00000576058 373 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.99□□□□□ -2.09
USP47Q96K76 AL138963.2-201ENST00000605137 226 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 AC013244.3-201ENST00000605614 388 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 AL139022.2-201ENST00000606934 443 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 AC009090.3-201ENST00000616553 565 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 MIR6134-201ENST00000617606 109 ntBASIC1.99□□□□□ -2.09
USP47Q96K76 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
USP47Q96K76 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.99□□□□□ -2.09
USP47Q96K76 AC106754.1-201ENST00000562632 1513 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 SNORA4.3-201ENST00000365564 137 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 RNU6-898P-201ENST00000365627 104 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AL133475.1-201ENST00000404414 305 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 FCF1P10-201ENST00000407590 479 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 RNU2-62P-201ENST00000410868 191 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.98□□□□□ -2.09
USP47Q96K76 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.98□□□□□ -2.09
USP47Q96K76 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.98□□□□□ -2.09
USP47Q96K76 UBE2FP3-201ENST00000436366 524 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 DUXAP8-207ENST00000456786 622 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.98□□□□□ -2.09
USP47Q96K76 MTND1P3-201ENST00000484956 952 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 RPS27P21-201ENST00000486977 252 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AC022493.1-201ENST00000492984 337 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AC119751.4-201ENST00000507498 357 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 RNA5SP61-201ENST00000516453 100 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 ACA59.2-201ENST00000517061 156 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AP004607.1-201ENST00000524456 203 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AC123904.2-201ENST00000548059 300 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.98□□□□□ -2.09
USP47Q96K76 MIR4452-201ENST00000583004 71 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.98□□□□□ -2.09
USP47Q96K76 AP001981.2-201ENST00000603241 418 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AC068276.1-201ENST00000605793 379 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AC107214.2-201ENST00000608204 634 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 AC009233.1-201ENST00000616477 371 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 MTND5P10-201ENST00000603719 1809 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USP47Q96K76 RNY4P24-201ENST00000362735 96 ntBASIC1.98□□□□□ -2.09
USP47Q96K76 Y_RNA.302-201ENST00000364997 102 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms