Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 AC137590.2-201ENST00000619709 240 ntBASIC3.59□□□□□ -1.83
NEIL1Q96FI4 AC027309.3-201ENST00000623419 351 ntBASIC3.59□□□□□ -1.83
NEIL1Q96FI4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.59□□□□□ -1.83
NEIL1Q96FI4 U6.92-201ENST00000636464 89 ntBASIC3.59□□□□□ -1.83
NEIL1Q96FI4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NEIL1Q96FI4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NEIL1Q96FI4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
NEIL1Q96FI4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AL391987.6-201ENST00000305671 199 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 RNU6-227P-201ENST00000362865 103 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 RNU1-132P-201ENST00000364300 164 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 Y_RNA.462-201ENST00000384268 102 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 MIR34A-201ENST00000385130 110 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 SNORD115-46-201ENST00000390982 71 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 MIR1183-201ENST00000408856 89 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AC091286.1-201ENST00000431233 461 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AC091390.1-201ENST00000433904 331 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AL512844.2-201ENST00000433990 593 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 HMGN2P20-201ENST00000437531 273 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 PIGFP3-201ENST00000441918 722 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AC092798.1-201ENST00000458542 409 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 KC877373.1-201ENST00000479066 408 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AC091167.1-201ENST00000492017 396 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 RNU6-377P-201ENST00000515965 102 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 SNORA31.9-201ENST00000516429 84 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 RNU6-572P-201ENST00000516724 80 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 Y_RNA.713-201ENST00000517013 96 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 MRPL49P2-201ENST00000521066 465 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 TRAV8-5-201ENST00000537369 341 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 TRAV28-201ENST00000557548 323 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AC104581.2-201ENST00000572227 430 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AC136932.1-201ENST00000574771 208 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AC130289.1-201ENST00000577321 73 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AL590392.1-201ENST00000604960 446 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 FAM27D1-201ENST00000612308 341 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AC006111.3-201ENST00000622137 383 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 AC118273.1-201ENST00000525324 3006 ntBASIC3.58□□□□□ -1.84
NEIL1Q96FI4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.58□□□□□ -1.84
NEIL1Q96FI4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEIL1Q96FI4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.57□□□□□ -1.84
NEIL1Q96FI4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEIL1Q96FI4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NEIL1Q96FI4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEIL1Q96FI4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
NEIL1Q96FI4 RNU1-14P-201ENST00000362759 152 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 Y_RNA.123-201ENST00000363338 102 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 RNU6-336P-201ENST00000364891 107 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NEIL1Q96FI4 Y_RNA.555-201ENST00000384673 110 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 RPS29P13-201ENST00000402041 169 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 MIR1911-201ENST00000410783 80 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.57□□□□□ -1.84
NEIL1Q96FI4 AL157831.1-201ENST00000426134 473 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 SETP5-201ENST00000437270 562 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 Z82210.1-201ENST00000440037 231 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 AL078601.1-201ENST00000444542 271 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NEIL1Q96FI4 AL513124.1-201ENST00000450410 614 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 RPL23AP81-201ENST00000455252 467 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 PRELID3BP1-201ENST00000457142 540 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 AC034236.1-201ENST00000469891 373 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 RPL32P34-201ENST00000486380 400 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 RNA5SP49-201ENST00000516450 115 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 RNU5B-3P-201ENST00000516601 115 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 Y_RNA.700-201ENST00000516806 100 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 RNA5SP165-201ENST00000517142 115 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 SNORA81.3-201ENST00000517283 198 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 AP003730.1-201ENST00000524605 285 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 DEFB108E-201ENST00000524692 240 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 CASP1P1-201ENST00000526345 212 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 AC093023.1-201ENST00000547375 507 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEIL1Q96FI4 MIR4300-201ENST00000581016 96 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 MIR376A1-201ENST00000616574 68 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 AL445567.2-201ENST00000618935 498 ntBASIC3.57□□□□□ -1.84
NEIL1Q96FI4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NEIL1Q96FI4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEIL1Q96FI4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
NEIL1Q96FI4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.57□□□□□ -1.84
NEIL1Q96FI4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
NEIL1Q96FI4 RNA5SP513-201ENST00000364648 118 ntBASIC3.56□□□□□ -1.84
NEIL1Q96FI4 RNU5E-7P-201ENST00000365290 117 ntBASIC3.56□□□□□ -1.84
NEIL1Q96FI4 Y_RNA.439-201ENST00000384119 94 ntBASIC3.56□□□□□ -1.84
NEIL1Q96FI4 RNY3P4-201ENST00000384428 101 ntBASIC3.56□□□□□ -1.84
NEIL1Q96FI4 SNORA70C-201ENST00000384538 135 ntBASIC3.56□□□□□ -1.84
NEIL1Q96FI4 RPS26P8-201ENST00000393490 348 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms