Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 AC008945.2-201ENST00000606056 604 ntBASIC2.68□□□□□ -1.98
HDAC11Q96DB2 AC097065.2-201ENST00000608159 533 ntBASIC2.68□□□□□ -1.98
HDAC11Q96DB2 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.68□□□□□ -1.98
HDAC11Q96DB2 MIR3670-4-201ENST00000612260 65 ntBASIC2.68□□□□□ -1.98
HDAC11Q96DB2 AC010378.1-201ENST00000619270 362 ntBASIC2.68□□□□□ -1.98
HDAC11Q96DB2 AC010297.1-201ENST00000623948 149 ntBASIC2.68□□□□□ -1.98
HDAC11Q96DB2 ZNF680P1-201ENST00000436625 1469 ntBASIC2.68□□□□□ -1.98
HDAC11Q96DB2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.68□□□□□ -1.98
HDAC11Q96DB2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HDAC11Q96DB2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HDAC11Q96DB2 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 RNU6-858P-201ENST00000362436 107 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 RNU6-1120P-201ENST00000362988 108 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 RNU6-384P-201ENST00000364900 104 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 RNU6-1042P-201ENST00000384204 107 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 RNU6-606P-201ENST00000384721 111 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 MIR218-1-201ENST00000384999 110 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 MIR34A-201ENST00000385130 110 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 CIR1P3-201ENST00000405137 479 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 FTH1P15-201ENST00000406984 280 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AL663109.1-201ENST00000411498 844 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 RPLP0P7-201ENST00000416050 667 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 PGBD4P6-201ENST00000421501 610 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AL451074.3-201ENST00000437709 472 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AC011005.2-201ENST00000487324 359 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 HMGB1P30-201ENST00000492455 606 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AP003392.2-201ENST00000527269 208 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AC135279.1-201ENST00000543493 504 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 MIR4703-201ENST00000577728 79 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AC073539.2-201ENST00000597113 165 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 MIR7843-201ENST00000622274 79 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 AC135776.4-201ENST00000624300 1904 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 MTND5P30-201ENST00000452896 1731 ntBASIC2.67□□□□□ -1.98
HDAC11Q96DB2 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HDAC11Q96DB2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AL359854.1-201ENST00000614203 1594 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AL109809.4-201ENST00000603520 2185 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 MTND4P27-201ENST00000450813 1354 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 RNA5SP393-201ENST00000363423 117 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 RNU6-72P-201ENST00000384285 79 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 RNU4-46P-201ENST00000410818 138 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 MTCO3P30-201ENST00000426425 670 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 TOMM20P4-201ENST00000427861 435 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC002486.1-201ENST00000435098 391 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 SNORD109B-201ENST00000458961 67 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 SNORD109A-201ENST00000459128 67 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 MRPL42P6-201ENST00000486397 371 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC092436.1-201ENST00000506450 503 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC023141.11-201ENST00000508864 202 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 MTND3P25-201ENST00000509243 135 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 RNU1-86P-201ENST00000516108 154 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 RNU1-107P-201ENST00000516617 154 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 RNU6-405P-201ENST00000516637 110 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 RNU6-1178P-201ENST00000516674 107 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 SNORA31.15-201ENST00000516771 132 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 OR5AQ1P-201ENST00000527596 927 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC009063.1-201ENST00000563342 702 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC091805.2-201ENST00000603848 235 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AL670379.10-201ENST00000604330 253 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AL670379.9-201ENST00000605428 253 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC080013.6-201ENST00000606185 215 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 AC007684.1-201ENST00000609671 477 ntBASIC2.66□□□□□ -1.98
HDAC11Q96DB2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.66□□□□□ -1.98
HDAC11Q96DB2 MAPK10-266ENST00000641066 6555 ntBASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms