Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 GSTA9P-201ENST00000406231 611 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 RNU2-29P-201ENST00000410423 189 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 RNA5SP184-201ENST00000411071 108 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 UBE2V1P10-201ENST00000414685 269 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.94□□□□□ -1.94
SKA1Q96BD8 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.94□□□□□ -1.94
SKA1Q96BD8 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.94□□□□□ -1.94
SKA1Q96BD8 NUP35P1-201ENST00000422734 947 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 SUMO1P4-201ENST00000429430 302 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 Z83846.1-201ENST00000446798 265 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 AL356010.1-201ENST00000456364 102 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 AC117503.1-201ENST00000472241 394 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 AC117440.1-201ENST00000474107 571 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 RPL23AP11-201ENST00000475260 469 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.94□□□□□ -1.94
SKA1Q96BD8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.94□□□□□ -1.94
SKA1Q96BD8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.94□□□□□ -1.94
SKA1Q96BD8 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.94□□□□□ -1.94
SKA1Q96BD8 AL133241.1-201ENST00000556832 487 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 AC105137.2-201ENST00000569073 466 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.94□□□□□ -1.94
SKA1Q96BD8 MTCYBP33-201ENST00000575007 1130 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 LRRC37A5P-203ENST00000580181 585 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 AC023043.3-201ENST00000593113 385 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 AL033523.1-201ENST00000605153 153 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 AC093788.1-201ENST00000609356 927 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.94□□□□□ -1.94
SKA1Q96BD8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.94□□□□□ -1.94
SKA1Q96BD8 AC007318.2-201ENST00000620999 243 ntBASIC2.94□□□□□ -1.94
SKA1Q96BD8 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SKA1Q96BD8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.94□□□□□ -1.94
SKA1Q96BD8 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.94□□□□□ -1.94
SKA1Q96BD8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.94□□□□□ -1.94
SKA1Q96BD8 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SKA1Q96BD8 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SKA1Q96BD8 MTND4P14-201ENST00000435799 1354 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 RNA5SP125-201ENST00000364843 120 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 RNA5SP240-201ENST00000365355 128 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 Y_RNA.359-201ENST00000365498 102 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.93□□□□□ -1.94
SKA1Q96BD8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.93□□□□□ -1.94
SKA1Q96BD8 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.93□□□□□ -1.94
SKA1Q96BD8 AC087499.2-201ENST00000432861 149 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.93□□□□□ -1.94
SKA1Q96BD8 HMGB1P31-201ENST00000437242 427 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.93□□□□□ -1.94
SKA1Q96BD8 CYP2C59P-201ENST00000457790 269 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 AC073901.1-201ENST00000462471 408 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 RN7SL297P-201ENST00000483161 293 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 AC079140.5-201ENST00000507882 310 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 AC008526.1-201ENST00000509149 338 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 SNORA43.2-201ENST00000516652 128 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SKA1Q96BD8 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.93□□□□□ -1.94
SKA1Q96BD8 AC136619.2-201ENST00000563361 631 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 AC073410.2-201ENST00000603240 332 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 AL031601.2-202ENST00000622650 282 ntBASIC2.93□□□□□ -1.94
SKA1Q96BD8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.92□□□□□ -1.94
SKA1Q96BD8 RNU6-1010P-201ENST00000362757 107 ntBASIC2.92□□□□□ -1.94
SKA1Q96BD8 RNU6-1103P-201ENST00000384150 107 ntBASIC2.92□□□□□ -1.94
SKA1Q96BD8 Y_RNA.582-201ENST00000391023 95 ntBASIC2.92□□□□□ -1.94
SKA1Q96BD8 AL139095.1-201ENST00000404326 391 ntBASIC2.92□□□□□ -1.94
SKA1Q96BD8 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.92□□□□□ -1.94
SKA1Q96BD8 EIF4EP4-201ENST00000424916 578 ntBASIC2.92□□□□□ -1.94
SKA1Q96BD8 AC063976.3-201ENST00000426849 329 ntBASIC2.92□□□□□ -1.94
SKA1Q96BD8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.92□□□□□ -1.94
SKA1Q96BD8 AL135938.1-201ENST00000443141 297 ntBASIC2.92□□□□□ -1.94
SKA1Q96BD8 AC140059.1-201ENST00000489238 361 ntBASIC2.92□□□□□ -1.94
SKA1Q96BD8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.92□□□□□ -1.94
SKA1Q96BD8 AC109329.1-201ENST00000518744 317 ntBASIC2.92□□□□□ -1.94
SKA1Q96BD8 AP005902.1-201ENST00000521358 186 ntBASIC2.92□□□□□ -1.94
SKA1Q96BD8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.92□□□□□ -1.94
SKA1Q96BD8 AC027807.1-201ENST00000559921 996 ntBASIC2.92□□□□□ -1.94
SKA1Q96BD8 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.92□□□□□ -1.94
SKA1Q96BD8 AL138963.2-201ENST00000605137 226 ntBASIC2.92□□□□□ -1.94
SKA1Q96BD8 AL121917.1-203ENST00000605534 577 ntBASIC2.92□□□□□ -1.94
SKA1Q96BD8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
SKA1Q96BD8 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SKA1Q96BD8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.91□□□□□ -1.94
SKA1Q96BD8 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SKA1Q96BD8 RPL9P7-201ENST00000330965 580 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 RNU5E-7P-201ENST00000365290 117 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 RNU6-434P-201ENST00000384376 107 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 RNU6-393P-201ENST00000384475 107 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 RNU1-57P-201ENST00000384491 166 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 MIR181A2-201ENST00000384863 110 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 RNU2-3P-201ENST00000410144 191 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.91□□□□□ -1.94
SKA1Q96BD8 OR9R1P-201ENST00000412200 877 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 AC002486.1-201ENST00000435098 391 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.91□□□□□ -1.94
SKA1Q96BD8 RNU7-63P-201ENST00000459054 62 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 DYNLL1P5-201ENST00000467158 270 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 HMGB1P29-201ENST00000505659 499 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 AC092436.1-201ENST00000506450 503 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 AF213884.2-201ENST00000510417 903 ntBASIC2.91□□□□□ -1.94
SKA1Q96BD8 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms