Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 RPS15AP9-201ENST00000439856 381 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 BRK1P2-201ENST00000442875 223 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 TAF9P1-201ENST00000445421 515 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 TAF9P2-201ENST00000454958 515 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 MTCYBP18-201ENST00000501056 747 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 AC116655.1-201ENST00000508324 901 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 ACA59.2-201ENST00000517061 156 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 AC090821.2-201ENST00000523552 176 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 CYCSP27-201ENST00000527643 293 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 AP003168.1-201ENST00000530091 307 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 AP004247.1-201ENST00000531556 1289 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 LRRC6P1-201ENST00000532188 885 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 MIR3198-2-201ENST00000577868 80 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 AC021755.4-201ENST00000616620 456 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 AL359314.1-201ENST00000616913 261 ntBASIC1.42□□□□□ -2.18
CCDC112Q8NEF3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 RNU6-392P-201ENST00000364926 101 ntBASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 AC104651.1-201ENST00000427559 735 ntBASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 KATNBL1P6-201ENST00000453433 915 ntBASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 RNU7-59P-201ENST00000459101 61 ntBASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 TOMM22P6-201ENST00000465035 409 ntBASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 AC006512.1-201ENST00000468816 291 ntBASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 RPL7P43-201ENST00000478876 753 ntBASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 FAM206BP-201ENST00000510179 541 ntBASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 RNU6-64P-201ENST00000517119 105 ntBASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 SNRPGP17-201ENST00000603780 214 ntBASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 ELOCP5-201ENST00000604924 333 ntBASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 AC034229.4-201ENST00000607861 441 ntBASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 RMST_6.1-201ENST00000611980 203 ntBASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.41□□□□□ -2.18
CCDC112Q8NEF3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.4□□□□□ -2.18
CCDC112Q8NEF3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CCDC112Q8NEF3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 MTCO1P17-201ENST00000411522 491 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 AC127391.1-201ENST00000411737 98 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 AC009310.1-201ENST00000414414 451 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 PAXBP1P1-201ENST00000449315 447 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 AL441985.1-201ENST00000457727 251 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 AC079395.1-201ENST00000510981 262 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 AC009902.1-201ENST00000519351 183 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 AP006587.4-201ENST00000526053 529 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 OR5B19P-201ENST00000531766 928 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 AC023813.2-201ENST00000564321 469 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 MIR6078-201ENST00000611069 100 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 AL121895.2-201ENST00000619558 447 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 AL589994.2-201ENST00000621124 579 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 AC099654.9-201ENST00000637055 678 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 U6.99-201ENST00000637524 83 ntBASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.4□□□□□ -2.19
CCDC112Q8NEF3 MIR518D-201ENST00000385014 87 ntBASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 AL133475.1-201ENST00000404414 305 ntBASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 AL359704.1-201ENST00000411586 781 ntBASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 RPS29P29-201ENST00000456396 171 ntBASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 RNU1-123P-201ENST00000458950 160 ntBASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 RNU5B-3P-201ENST00000516601 115 ntBASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 AC092451.2-201ENST00000538746 658 ntBASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 MTND4LP25-201ENST00000570218 163 ntBASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 AL353770.2-201ENST00000620024 78 ntBASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 AL136313.1-201ENST00000624804 202 ntBASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC112Q8NEF3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 RNU6-1284P-201ENST00000363701 100 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 RNU6-1280P-201ENST00000365211 107 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 Y_RNA.472-201ENST00000384322 102 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 RNU6-1257P-201ENST00000384625 110 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 MIR30A-201ENST00000385092 71 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 RNA5SP465-201ENST00000391195 109 ntBASIC1.38□□□□□ -2.19
CCDC112Q8NEF3 USP9YP33-201ENST00000412220 421 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms