Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MIR30B-201ENST00000384850 88 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 MIR325-201ENST00000385260 98 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 RPL23AP82-202ENST00000427528 469 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 AL445584.1-201ENST00000431451 330 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 AC091812.1-201ENST00000432235 1948 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 AL591704.1-201ENST00000432574 275 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 AL359672.1-201ENST00000442302 409 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 TRBV12-2-201ENST00000489763 344 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 AC096745.1-201ENST00000509945 370 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 AMZ2P1-203ENST00000565833 850 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 AC067852.3-201ENST00000589177 561 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 AC007619.2-201ENST00000605743 379 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 AC073308.1-201ENST00000623696 305 ntBASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SIMC1Q8NDZ2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 AL359693.1-201ENST00000614959 2407 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 AC007656.2-201ENST00000624902 4547 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 AL353746.1-201ENST00000566293 6881 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 Y_RNA.2-201ENST00000362330 96 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 RNA5SP119-201ENST00000362715 117 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-450P-201ENST00000364654 107 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-99P-201ENST00000364721 107 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-190P-201ENST00000384154 102 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 Y_RNA.485-201ENST00000384395 102 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-14P-201ENST00000384630 106 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 Y_RNA.556-201ENST00000384677 113 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-1109P-201ENST00000391187 107 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 RPS15AP6-201ENST00000420703 385 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 NOTCH2P1-201ENST00000443481 624 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 PRDX3P3-201ENST00000447765 522 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 RPL21P11-201ENST00000461458 483 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 AC084198.1-201ENST00000477747 402 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 AC104136.1-201ENST00000512969 394 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 AC025423.5-201ENST00000550230 219 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 MIR4425-201ENST00000580572 84 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 HSPE1P7-201ENST00000604681 321 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 AL354798.1-201ENST00000622505 329 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 AC012442.3-202ENST00000636742 206 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 ZNF826P-207ENST00000622273 1910 ntBASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.56□□□□□ -1.84
SIMC1Q8NDZ2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 CEP170P1-201ENST00000502249 4587 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-1059P-201ENST00000363752 98 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 RNA5SP97-201ENST00000365006 84 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-214P-201ENST00000384130 107 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 SNORA9-201ENST00000384215 133 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 Y_RNA.512-201ENST00000384518 102 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 MIR491-201ENST00000384877 84 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 RNU6-823P-201ENST00000391042 103 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 AL139247.1-201ENST00000422768 325 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 AC092436.3-201ENST00000511788 257 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 Y_RNA.668-201ENST00000516233 93 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 RNU4-77P-201ENST00000516692 156 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 RN7SKP60-201ENST00000516985 239 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 Y_RNA.721-201ENST00000517207 102 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 AC093331.1-201ENST00000521474 169 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 AC007991.1-201ENST00000522680 631 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 AC012119.1-201ENST00000603184 222 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 SRGNP1-201ENST00000603392 451 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 AC007179.3-201ENST00000604976 235 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 AC100812.1-201ENST00000607622 580 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 AC107871.2-201ENST00000612894 502 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SIMC1Q8NDZ2 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SIMC1Q8NDZ2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms