Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF169Q8NCN4 SCARNA13-201ENST00000516672 275 ntBASIC3.69□□□□□ -1.82
RNF169Q8NCN4 RNU6-1137P-201ENST00000517073 99 ntBASIC3.69□□□□□ -1.82
RNF169Q8NCN4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.69□□□□□ -1.82
RNF169Q8NCN4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF169Q8NCN4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF169Q8NCN4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF169Q8NCN4 MIR4680-201ENST00000580906 66 ntBASIC3.69□□□□□ -1.82
RNF169Q8NCN4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF169Q8NCN4 AC012493.2-201ENST00000595083 291 ntBASIC3.69□□□□□ -1.82
RNF169Q8NCN4 AC011890.2-201ENST00000613393 294 ntBASIC3.69□□□□□ -1.82
RNF169Q8NCN4 AC083806.3-201ENST00000614016 455 ntBASIC3.69□□□□□ -1.82
RNF169Q8NCN4 AL355810.1-201ENST00000614629 552 ntBASIC3.69□□□□□ -1.82
RNF169Q8NCN4 AC090132.2-201ENST00000615881 347 ntBASIC3.69□□□□□ -1.82
RNF169Q8NCN4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.69□□□□□ -1.82
RNF169Q8NCN4 MIR8057-201ENST00000620957 69 ntBASIC3.69□□□□□ -1.82
RNF169Q8NCN4 AC092608.2-201ENST00000624427 218 ntBASIC3.69□□□□□ -1.82
RNF169Q8NCN4 U6.98-201ENST00000637157 84 ntBASIC3.69□□□□□ -1.82
RNF169Q8NCN4 AL049641.1-201ENST00000441055 1948 ntBASIC3.69□□□□□ -1.82
RNF169Q8NCN4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF169Q8NCN4 Z83843.1-201ENST00000604070 3685 ntBASIC3.69□□□□□ -1.82
RNF169Q8NCN4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
RNF169Q8NCN4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF169Q8NCN4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF169Q8NCN4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF169Q8NCN4 Y_RNA.33-201ENST00000362591 102 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 Y_RNA.158-201ENST00000363651 101 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 RNU6-512P-201ENST00000364438 103 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 EI24P2-201ENST00000397776 1076 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 RNU2-71P-201ENST00000411395 189 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF169Q8NCN4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF169Q8NCN4 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF169Q8NCN4 RPL21P66-201ENST00000426566 466 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 HMGB1P9-201ENST00000429856 646 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 USP9YP30-201ENST00000430729 455 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF169Q8NCN4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF169Q8NCN4 RNU7-187P-201ENST00000458985 68 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 RPL31P13-201ENST00000484151 370 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 AL359273.1-201ENST00000510918 627 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 RNU1-86P-201ENST00000516108 154 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 RNU1-107P-201ENST00000516617 154 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 ATP5F1P5-201ENST00000526403 760 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 AC004024.1-201ENST00000549244 247 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.68□□□□□ -1.82
RNF169Q8NCN4 AC106900.2-201ENST00000604994 317 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 YPEL5P2-201ENST00000605553 359 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 RNU6-85P-201ENST00000605989 107 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF169Q8NCN4 AL078596.1-201ENST00000624856 447 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF169Q8NCN4 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.68□□□□□ -1.82
RNF169Q8NCN4 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF169Q8NCN4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF169Q8NCN4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
RNF169Q8NCN4 MTND4P1-201ENST00000457501 1466 ntBASIC3.67□□□□□ -1.82
RNF169Q8NCN4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 Y_RNA.473-201ENST00000384333 102 ntBASIC3.67□□□□□ -1.82
RNF169Q8NCN4 RNU6-306P-201ENST00000384617 107 ntBASIC3.67□□□□□ -1.82
RNF169Q8NCN4 RNU2-33P-201ENST00000410344 192 ntBASIC3.67□□□□□ -1.82
RNF169Q8NCN4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 AC006989.1-201ENST00000427212 131 ntBASIC3.67□□□□□ -1.82
RNF169Q8NCN4 SNRPEP4-201ENST00000435815 279 ntBASIC3.67□□□□□ -1.82
RNF169Q8NCN4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 RPS29P31-201ENST00000446147 164 ntBASIC3.67□□□□□ -1.82
RNF169Q8NCN4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 RNU6-143P-201ENST00000516942 93 ntBASIC3.67□□□□□ -1.82
RNF169Q8NCN4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF169Q8NCN4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF169Q8NCN4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF169Q8NCN4 USP8P1-201ENST00000494673 3183 ntBASIC3.66□□□□□ -1.82
RNF169Q8NCN4 RNA5SP374-201ENST00000362939 125 ntBASIC3.66□□□□□ -1.82
RNF169Q8NCN4 RNU6-490P-201ENST00000362985 107 ntBASIC3.66□□□□□ -1.82
RNF169Q8NCN4 Y_RNA.324-201ENST00000365165 102 ntBASIC3.66□□□□□ -1.82
RNF169Q8NCN4 RNU6-842P-201ENST00000384269 107 ntBASIC3.66□□□□□ -1.82
RNF169Q8NCN4 RNU6-463P-201ENST00000384340 107 ntBASIC3.66□□□□□ -1.82
RNF169Q8NCN4 Y_RNA.496-201ENST00000384444 101 ntBASIC3.66□□□□□ -1.82
RNF169Q8NCN4 RNU6-1179P-201ENST00000384667 107 ntBASIC3.66□□□□□ -1.82
RNF169Q8NCN4 MRPL42P3-201ENST00000401492 326 ntBASIC3.66□□□□□ -1.82
RNF169Q8NCN4 MIR548F4-201ENST00000408515 105 ntBASIC3.66□□□□□ -1.82
RNF169Q8NCN4 RNU6-985P-201ENST00000410182 104 ntBASIC3.66□□□□□ -1.82
RNF169Q8NCN4 AC096664.2-201ENST00000411843 406 ntBASIC3.66□□□□□ -1.82
RNF169Q8NCN4 RPL27AP8-201ENST00000424277 446 ntBASIC3.66□□□□□ -1.82
RNF169Q8NCN4 AL356867.1-201ENST00000429623 299 ntBASIC3.66□□□□□ -1.82
RNF169Q8NCN4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF169Q8NCN4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF169Q8NCN4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF169Q8NCN4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF169Q8NCN4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms