Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 UBE2D3P4-201ENST00000441973 436 ntBASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 EPS15P1-201ENST00000448836 336 ntBASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 RPL7P43-201ENST00000478876 753 ntBASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 Y_RNA.672-201ENST00000516289 104 ntBASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 AC022878.1-201ENST00000530684 149 ntBASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 AC135279.1-201ENST00000543493 504 ntBASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 OR11H5P-201ENST00000554039 926 ntBASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 AC136619.2-201ENST00000563361 631 ntBASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 HMGN1P30-201ENST00000589286 268 ntBASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 AC007229.1-201ENST00000590455 412 ntBASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.29□□□□□ -2.04
HDDC3Q8N4P3 AC103710.2-202ENST00000641454 2853 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 RNU1-57P-201ENST00000384491 166 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 MIR558-201ENST00000384920 94 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 MIR561-201ENST00000385216 97 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 RNA5SP111-201ENST00000411386 101 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 UBE2V1P10-201ENST00000414685 269 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 AIMP1P2-201ENST00000425294 312 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 AC112673.1-201ENST00000513168 575 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 SNORA4.4-201ENST00000515921 135 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 SNORA48.11-201ENST00000517015 89 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 AP003467.2-201ENST00000520175 319 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 AC009094.1-201ENST00000564443 426 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 AC078899.2-201ENST00000595282 212 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 RPL30P11-203ENST00000598995 310 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 AC021646.1-201ENST00000605469 484 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 AL137847.3-201ENST00000611521 109 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 AC080100.1-201ENST00000624239 5356 ntBASIC2.28□□□□□ -2.04
HDDC3Q8N4P3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
HDDC3Q8N4P3 AL596028.1-201ENST00000326971 197 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 Y_RNA.338-201ENST00000365320 114 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 RNU1-51P-201ENST00000365345 176 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 RNU6-72P-201ENST00000384285 79 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 RNU6-1179P-201ENST00000384667 107 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 MIR221-201ENST00000385135 110 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 AL079342.1-201ENST00000401460 267 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 RN7SKP32-201ENST00000410167 303 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 ISCA1P6-201ENST00000427740 390 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 AC018634.1-201ENST00000437554 401 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 PSPHP1-201ENST00000450062 261 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 IGLV3-17-201ENST00000519099 244 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 AP001372.4-201ENST00000524889 472 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 MTND1P24-201ENST00000552175 861 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 RPL21P5-201ENST00000554662 472 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 MTCYBP33-201ENST00000575007 1130 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 AC090616.2-202ENST00000584248 222 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 AL138889.2-201ENST00000603883 242 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 AC025811.1-201ENST00000604312 472 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 AC016727.1-205ENST00000605437 569 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 AL157786.1-207ENST00000627771 695 ntBASIC2.27□□□□□ -2.05
HDDC3Q8N4P3 SNORD14B-201ENST00000364533 90 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 RNU6-1032P-201ENST00000384100 107 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 RNU6-843P-201ENST00000384454 104 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 RPL23AP32-201ENST00000395315 459 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 RPS3AP36-201ENST00000398190 775 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 GSTA9P-201ENST00000406231 611 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 SNORA11.4-201ENST00000408823 129 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 AL365400.1-201ENST00000431854 640 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 NDUFB1P2-201ENST00000449477 176 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 HMGN2P23-201ENST00000456759 269 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 RPL30P6-201ENST00000475925 342 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 AC107032.1-201ENST00000485945 480 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 AC005178.1-201ENST00000508392 440 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 RNU6-1129P-201ENST00000515964 104 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 SNORA31.11-201ENST00000516528 139 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 SNORA31.25-201ENST00000517242 134 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 AC121758.2-201ENST00000553271 193 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 MIR4529-201ENST00000578110 78 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 MIR6766-201ENST00000622641 72 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 SCARNA4-202ENST00000625402 129 ntBASIC2.26□□□□□ -2.05
HDDC3Q8N4P3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HDDC3Q8N4P3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms