Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR5690-201ENST00000583739 73 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 NUTF2P8-201ENST00000604593 363 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AC080078.3-201ENST00000605407 463 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 ATP5A1P2-202ENST00000616464 443 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 AL049781.1-201ENST00000623195 3585 ntBASIC2.94□□□□□ -1.94
CLIP4Q8N3C7 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.33-201ENST00000362591 102 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 RNU6-214P-201ENST00000384130 107 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 RNU6-601P-201ENST00000384540 107 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 SNORA46-201ENST00000384762 135 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 RNU6-607P-201ENST00000411283 108 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AL353621.1-201ENST00000418219 243 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AL158156.1-201ENST00000422509 473 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 RPL7P37-201ENST00000425095 738 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AL590383.1-201ENST00000428602 75 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC097713.2-201ENST00000430199 356 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AL359672.1-201ENST00000442302 409 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC009237.8-201ENST00000445492 379 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 UQCRHP3-201ENST00000451503 251 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 FABP5P15-201ENST00000453566 214 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 RNA5SP310-201ENST00000459084 116 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC130509.1-201ENST00000464158 433 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 KC877373.1-201ENST00000479066 408 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 RNA5SP76-201ENST00000516277 87 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 SNORA67.7-201ENST00000516664 135 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 RNA5SP291-201ENST00000517222 105 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AL163153.1-201ENST00000554223 283 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 BNIP3P22-201ENST00000593399 556 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC022432.1-201ENST00000595739 310 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC078795.3-201ENST00000602913 472 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC005034.5-201ENST00000604219 466 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC073657.2-201ENST00000605661 303 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC124303.1-201ENST00000605703 360 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 uc_338.25-201ENST00000613756 156 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 MIR6128-201ENST00000615528 109 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC006133.1-201ENST00000617106 264 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 AC010378.1-201ENST00000619270 362 ntBASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.93□□□□□ -1.94
CLIP4Q8N3C7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 MTND4P27-201ENST00000450813 1354 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.132-201ENST00000363421 102 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 SNORD42.2-201ENST00000365570 69 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 RNU6-395P-201ENST00000365662 106 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 RNU2-3P-201ENST00000410144 191 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 RNU6-1025P-201ENST00000410629 104 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 CYCSP33-201ENST00000414485 327 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 HMGB1P9-201ENST00000429856 646 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 AL159987.2-201ENST00000432754 307 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 AC092573.2-201ENST00000434546 243 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 SSXP4-201ENST00000451349 245 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 CECR9-201ENST00000453421 199 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 RNU7-138P-201ENST00000459479 64 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 AL135752.1-201ENST00000479477 471 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 RPL30P5-201ENST00000494923 336 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 SLC25A15P5-201ENST00000508033 253 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 AC069113.1-201ENST00000517763 267 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 AP003122.3-201ENST00000526316 255 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 AC084851.1-201ENST00000529105 249 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 AC020661.2-201ENST00000560114 134 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 MIR4429-201ENST00000580105 73 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 LRRC37A5P-203ENST00000580181 585 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 RNU6-85P-201ENST00000605989 107 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 MIR92B-201ENST00000607575 96 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 AC134503.1-201ENST00000633048 54 ntBASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLIP4Q8N3C7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.128-201ENST00000363391 112 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.146-201ENST00000363549 102 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.162-201ENST00000363683 102 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 RNU6-1188P-201ENST00000363795 107 ntBASIC2.91□□□□□ -1.94
CLIP4Q8N3C7 Y_RNA.187-201ENST00000363918 113 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms