Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
KRT78Q8N1N4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.145-201ENST00000363527 102 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.167-201ENST00000363735 109 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 RNU1-100P-201ENST00000365255 165 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.4□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.384-201ENST00000383909 102 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.422-201ENST00000384054 114 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 RNU6-463P-201ENST00000384340 107 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 RNU6-19P-201ENST00000384718 107 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 MIR518D-201ENST00000385014 87 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 MIR147B-201ENST00000390185 80 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 AL356967.1-201ENST00000406305 431 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.4□□□□□ -1.87
KRT78Q8N1N4 MTND3P8-201ENST00000412909 339 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 NDUFB4P5-201ENST00000415445 361 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 AL096701.2-201ENST00000416920 238 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 IFNA20P-201ENST00000436840 528 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 RPS29P31-201ENST00000446147 164 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 PPP1R2P5-201ENST00000457256 603 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 SNORD19B-201ENST00000459623 84 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 AC021146.2-201ENST00000504736 556 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 SNORD19.2-201ENST00000516978 73 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 RNU1-45P-201ENST00000517191 141 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 AC109479.2-201ENST00000517842 174 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.4□□□□□ -1.87
KRT78Q8N1N4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.4□□□□□ -1.87
KRT78Q8N1N4 AC006006.1-201ENST00000603082 144 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 AC136443.5-201ENST00000603741 370 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 AP000787.2-201ENST00000604432 568 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 AC104237.2-201ENST00000612456 443 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.4□□□□□ -1.87
KRT78Q8N1N4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KRT78Q8N1N4 AL121772.2-201ENST00000614331 297 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3.4□□□□□ -1.87
KRT78Q8N1N4 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.4□□□□□ -1.87
KRT78Q8N1N4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
KRT78Q8N1N4 AC010889.1-201ENST00000566193 2666 ntBASIC3.4□□□□□ -1.87
KRT78Q8N1N4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
KRT78Q8N1N4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
KRT78Q8N1N4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.146-201ENST00000363549 102 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.259-201ENST00000364619 101 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 RNU6-750P-201ENST00000390946 107 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 AC002075.2-201ENST00000425207 252 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 PTGES3P4-201ENST00000426243 356 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 AL365496.1-201ENST00000426885 215 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 AC108059.2-201ENST00000434626 151 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 AC005019.1-201ENST00000436455 431 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 HMGB1P18-201ENST00000438801 619 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 AL359672.1-201ENST00000442302 409 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 AL357552.1-201ENST00000445254 415 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 RPS29P12-201ENST00000460178 152 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 RPL23AP49-201ENST00000492925 468 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 RNU6-377P-201ENST00000515965 102 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 RNU6-256P-201ENST00000516747 97 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 AC010186.2-204ENST00000537668 439 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 MIR3668-201ENST00000582138 75 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 SNRPGP17-201ENST00000603780 214 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 AC123912.5-201ENST00000605470 343 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 AL132822.1-201ENST00000617063 513 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 UCA1.1-201ENST00000620952 75 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 AC091564.4-201ENST00000533934 2194 ntBASIC3.39□□□□□ -1.87
KRT78Q8N1N4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
KRT78Q8N1N4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.202-201ENST00000364083 110 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.315-201ENST00000365117 102 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 SNORA33.2-201ENST00000365413 134 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 SNORD42.2-201ENST00000365570 69 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 Y_RNA.387-201ENST00000383918 102 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 RNU6-128P-201ENST00000383976 107 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 SNORA5A-201ENST00000384111 134 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 RNU6-43P-201ENST00000384302 107 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 RNU6-831P-201ENST00000384548 107 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 MIR184-201ENST00000384962 84 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 MT-TR-201ENST00000387439 65 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AL159987.2-201ENST00000432754 307 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AC124916.1-201ENST00000444020 547 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AL133547.1-201ENST00000448546 220 ntBASIC3.38□□□□□ -1.87
KRT78Q8N1N4 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.38□□□□□ -1.87
KRT78Q8N1N4 MTND4P17-201ENST00000470444 350 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms