Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 AL591212.2-201ENST00000433923 257 ntBASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 AL512286.1-201ENST00000439244 400 ntBASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 RPL23AP6-201ENST00000446637 472 ntBASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 AL590365.1-201ENST00000450788 243 ntBASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 RNU2-10P-201ENST00000516375 211 ntBASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 RNU6-1183P-201ENST00000517054 60 ntBASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 OR5AL2P-201ENST00000532185 920 ntBASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 AL365204.3-201ENST00000612448 685 ntBASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 AC017037.3-201ENST00000625016 472 ntBASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 AL512643.1-201ENST00000635735 524 ntBASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 MTND5P42-201ENST00000637720 498 ntBASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDKL3Q8IVW4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 Z98749.2-208ENST00000381646 500 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 MIR764-201ENST00000390811 85 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 SNORD115.1-201ENST00000391109 76 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 MIR1294-201ENST00000408503 142 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 SNORD56-201ENST00000413522 71 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 OR51A5P-201ENST00000415429 942 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 USP9YP15-201ENST00000442391 422 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 BRK1P2-201ENST00000442875 223 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 ZNF114P1-201ENST00000453500 292 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 MTND1P12-201ENST00000455231 147 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC117503.1-201ENST00000472241 394 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 RPS29P11-201ENST00000496507 171 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 RNU6-581P-201ENST00000516214 105 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 RNU6-1092P-201ENST00000516955 87 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC009902.1-201ENST00000519351 183 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC084851.1-201ENST00000529105 249 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC015712.3-201ENST00000559380 164 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC009094.1-201ENST00000564443 426 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 MIR5697-201ENST00000578045 78 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 NRBF2P1-201ENST00000587407 859 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC243960.4-201ENST00000600532 288 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 BNIP3P10-201ENST00000605360 577 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC022893.3-201ENST00000607665 437 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC004223.4-201ENST00000612426 332 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC130324.3-201ENST00000614165 542 ntBASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.81□□□□□ -2.12
CDKL3Q8IVW4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 AC092809.3-201ENST00000415453 231 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 AC092001.1-201ENST00000453012 261 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 AC093899.1-201ENST00000457984 376 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 AL139824.2-201ENST00000458731 1095 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 AC108210.2-201ENST00000503681 201 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 SMURF2P1-201ENST00000514992 481 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 RNU6-1129P-201ENST00000515964 104 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 RN7SKP287-201ENST00000516546 266 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 RNU6-677P-201ENST00000516914 101 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 AC011979.2-201ENST00000527568 352 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 AP005639.2-201ENST00000527592 928 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 LINC00933-203ENST00000559812 219 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 AC090897.2-201ENST00000581715 130 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 MIR4760-201ENST00000585040 80 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 AC093424.1-201ENST00000604999 338 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 AC027807.2-201ENST00000616099 408 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 MIR7844-201ENST00000616161 122 ntBASIC1.8□□□□□ -2.12
CDKL3Q8IVW4 CDC27P3-201ENST00000635418 1910 ntBASIC1.79□□□□□ -2.12
CDKL3Q8IVW4 Z75746.1-201ENST00000440243 2080 ntBASIC1.79□□□□□ -2.12
CDKL3Q8IVW4 RNU5F-7P-201ENST00000363696 115 ntBASIC1.79□□□□□ -2.12
CDKL3Q8IVW4 SNORD48-201ENST00000364953 64 ntBASIC1.79□□□□□ -2.12
CDKL3Q8IVW4 RNA5SP240-201ENST00000365355 128 ntBASIC1.79□□□□□ -2.12
CDKL3Q8IVW4 RNU6-946P-201ENST00000383878 107 ntBASIC1.79□□□□□ -2.12
CDKL3Q8IVW4 Y_RNA.534-201ENST00000384599 112 ntBASIC1.79□□□□□ -2.12
CDKL3Q8IVW4 MIR583-201ENST00000384846 75 ntBASIC1.79□□□□□ -2.12
CDKL3Q8IVW4 MIR301A-201ENST00000385261 86 ntBASIC1.79□□□□□ -2.12
CDKL3Q8IVW4 Y_RNA.608-201ENST00000410647 95 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms