Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ZNF826P-207ENST00000622273 1910 ntBASIC3.09□□□□□ -1.92
ZNF549Q6P9A3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.09□□□□□ -1.92
ZNF549Q6P9A3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 RNU6-266P-201ENST00000364225 107 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 RNY1P14-201ENST00000384426 108 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 SNORA46-201ENST00000384762 135 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 MIR578-201ENST00000384828 96 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 PTMAP5-201ENST00000393073 333 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 EI24P2-201ENST00000397776 1076 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 MRPL42P3-201ENST00000401492 326 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 HSPE1P26-201ENST00000405341 275 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 AC243428.1-201ENST00000421099 264 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 AL359672.1-201ENST00000442302 409 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 RN7SL863P-201ENST00000462370 296 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 SUMO2P6-201ENST00000505273 288 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 AC092436.3-201ENST00000511788 257 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 RNU6-914P-201ENST00000516749 109 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 Y_RNA.708-201ENST00000516950 96 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 AP004371.1-201ENST00000525240 214 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 AL121603.1-201ENST00000553815 142 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 UBL5P2-201ENST00000583788 219 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 AC133104.2-201ENST00000615272 193 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 AC018692.3-201ENST00000623929 123 ntBASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.08□□□□□ -1.92
ZNF549Q6P9A3 MTND5P27-201ENST00000428871 1720 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AL049641.1-201ENST00000441055 1948 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC138393.1-203ENST00000327086 343 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 RNU6-1181P-201ENST00000384191 106 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 RNVU1-14-201ENST00000384770 164 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 RPL21P3-201ENST00000395517 478 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 RNA5SP120-201ENST00000410900 112 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC080125.1-201ENST00000414888 684 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 MTCO1P39-201ENST00000426148 480 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 UQCRHP3-201ENST00000451503 251 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC146507.2-201ENST00000460608 476 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC109925.1-201ENST00000478069 331 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 RN7SL20P-201ENST00000488827 297 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC026801.1-201ENST00000497178 464 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 RNU6-120P-201ENST00000516077 103 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 RNA5SP384-201ENST00000516615 116 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC087854.1-201ENST00000519706 414 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AP003122.3-201ENST00000526316 255 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 COX6CP5-201ENST00000527162 228 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC025423.5-201ENST00000550230 219 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC011494.1-201ENST00000596454 237 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AL161423.1-201ENST00000613700 262 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC083806.3-201ENST00000614016 455 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 MIR8058-201ENST00000615737 89 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 ATP5A1P2-202ENST00000616464 443 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC048347.1-201ENST00000624621 427 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 AC116096.1-201ENST00000566804 2314 ntBASIC3.07□□□□□ -1.92
ZNF549Q6P9A3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 ZNF807-201ENST00000328088 1707 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 MIR208A-201ENST00000362287 71 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 SNORD62.1-201ENST00000362541 86 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 RNU6-1059P-201ENST00000363752 98 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 SNORA70.4-201ENST00000365509 134 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC117470.1-201ENST00000381974 330 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 RNU6-306P-201ENST00000384617 107 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 SNORD67-201ENST00000390833 111 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 RNU6-1106P-201ENST00000390845 107 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 RNU2-3P-201ENST00000410144 191 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 RNU4-47P-201ENST00000410876 114 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 CYCSP33-201ENST00000414485 327 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 RPL21P90-201ENST00000415692 466 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 USP9YP30-201ENST00000430729 455 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 MTCYBP9-201ENST00000431021 303 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC236972.1-201ENST00000433225 199 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms