Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 uc_338.25-201ENST00000613756 156 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC38Q502W7 RMST_7.1-201ENST00000621935 268 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 AL160394.1-201ENST00000624765 724 ntBASIC3.23□□□□□ -1.89
CCDC38Q502W7 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC38Q502W7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC38Q502W7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CCDC38Q502W7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC38Q502W7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC38Q502W7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC38Q502W7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC38Q502W7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC38Q502W7 MIR491-201ENST00000384877 84 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 MIR483-201ENST00000385070 76 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 MIR147B-201ENST00000390185 80 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 U3.26-201ENST00000391236 204 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 RNA5SP118-201ENST00000410385 109 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 AL671855.1-201ENST00000446875 1203 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 AC107626.1-201ENST00000471084 183 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 RNU6-56P-201ENST00000516986 93 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 CR383656.8-201ENST00000549046 145 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.22□□□□□ -1.89
CCDC38Q502W7 AC009163.5-201ENST00000575421 637 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC38Q502W7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC38Q502W7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC38Q502W7 AC024153.1-201ENST00000603103 365 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 AC008121.1-201ENST00000603244 268 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 AP000907.4-201ENST00000604143 237 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 AL670379.10-201ENST00000604330 253 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 ATP1B3P1-201ENST00000605365 821 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 AL670379.9-201ENST00000605428 253 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 RMST_3.1-201ENST00000611651 109 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 AL359198.2-201ENST00000611836 194 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 uc_338.14-201ENST00000613162 166 ntBASIC3.22□□□□□ -1.89
CCDC38Q502W7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.22□□□□□ -1.89
CCDC38Q502W7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CCDC38Q502W7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
CCDC38Q502W7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CCDC38Q502W7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC38Q502W7 RNU6-522P-201ENST00000364497 107 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 SNORA68.1-201ENST00000364537 132 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 RNU6-1083P-201ENST00000384022 107 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 RNVU1-14-201ENST00000384770 164 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 AL357075.1-201ENST00000404107 726 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 SNORD88.1-201ENST00000408684 91 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 RNU4-26P-201ENST00000410270 107 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 AL096701.2-201ENST00000416920 238 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 AL365400.1-201ENST00000431854 640 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 AC009296.1-201ENST00000443146 155 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC38Q502W7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC38Q502W7 RPS29P25-201ENST00000481709 171 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.21□□□□□ -1.9
CCDC38Q502W7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC38Q502W7 AC098799.2-201ENST00000509466 868 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 SCARNA17.1-201ENST00000516211 143 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 SCARNA17.2-201ENST00000516334 143 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 RPL7P20-201ENST00000520308 745 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 AC023050.3-201ENST00000541142 333 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.21□□□□□ -1.9
CCDC38Q502W7 APOOP1-201ENST00000604695 592 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC38Q502W7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC38Q502W7 SCARNA17.4-201ENST00000614296 143 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 AC002553.4-201ENST00000616896 331 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 MIR7975-201ENST00000619350 68 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 AC121333.1-201ENST00000567488 2709 ntBASIC3.21□□□□□ -1.9
CCDC38Q502W7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.21□□□□□ -1.9
CCDC38Q502W7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC38Q502W7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CCDC38Q502W7 AC138915.1-201ENST00000565427 1685 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 AC073346.2-201ENST00000624724 2058 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 RNU6-858P-201ENST00000362436 107 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC38Q502W7 SAR1AP4-201ENST00000429225 591 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 Z75741.1-201ENST00000446793 314 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC38Q502W7 HMGN2P26-201ENST00000463169 339 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 MED28P2-201ENST00000475771 317 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CCDC38Q502W7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC38Q502W7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC38Q502W7 RNA5SP76-201ENST00000516277 87 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 SNORA43.2-201ENST00000516652 128 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 RNU6-826P-201ENST00000516827 104 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC38Q502W7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.2□□□□□ -1.9
CCDC38Q502W7 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 AP000787.2-201ENST00000604432 568 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 AC091953.5-201ENST00000622919 233 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 MIR3662-201ENST00000637030 95 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 MIR3529-201ENST00000637713 78 ntBASIC3.2□□□□□ -1.9
CCDC38Q502W7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC38Q502W7 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC38Q502W7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC38Q502W7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms